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- 20.109(F21):Fall 2021 schedule (34 links)
- 20.109(S22):Assignments (34 links)
- 20.109(F21):Homework (34 links)
- 20.109(S22):Class data (34 links)
- 20.109(S22):Spring 2022 schedule (34 links)
- 20.109(F22):Module 2 (34 links)
- 20.109(F21):Module 1 (34 links)
- 20.109(F22):FYI (34 links)
- 20.109(F22):Module 3 (34 links)
- 20.109(F11):Module 2 (34 links)
- 20.109(F23):Assignments (34 links)
- 20.109(F23):Fall 2023 schedule (34 links)
- 20.109(F21):Module 2 (34 links)
- 20.109(S22):Module 1 (34 links)
- 20.109(F22):Homework (34 links)
- 20.109(F23):Class data (34 links)
- 20.109(F21):Assignments (34 links)
- 20.109(S22):FYI (34 links)
- 20.109(S22):Module 2 (34 links)
- 20.109(F23):Communication (34 links)
- 20.109(F23):Module 1 (34 links)
- 20.109(F21):Class data (34 links)
- 20.109(S22):Homework (34 links)
- 20.109(S22):Module 3 (34 links)
- 20.109(F11): Assignments (33 links)
- 20.109(F11): Fall 2011 schedule (33 links)
- 20.109(F21):FYI (33 links)
- 20.109(F11):Lab basics (33 links)
- 20.109(F11):Module 1 (33 links)
- 20.109(F11):OWW basics (33 links)
- 20.109(F11):People (33 links)
- 20.109(F10) (31 links)
- 20.109(S09):People (31 links)
- 20.109(S23):Spring 2023 schedule (30 links)
- 20.109(S09):Lab basics (30 links)
- 20.109(S09):Module 1 (30 links)
- 20.109(S09):Module 2 (30 links)
- 20.109(S09):Module 3 (30 links)
- 20.109(S09): Spring 2009 schedule (30 links)
- 20.109(S09) (30 links)
- Sandbox (29 links)
- 20.109(F10):People (28 links)
- 20.109(F10): Fall 2010 schedule (28 links)
- 20.109(F10):Lab basics (28 links)
- 20.109(F10):Module 1 (28 links)
- 20.109(F10):Module 2 (28 links)
- 20.109(F10):Module 3 (28 links)
- 20.109(F10):OWW basics (28 links)
- Geometrical optics and ray tracing (21 links)
- 20.345:Main page (21 links)
- Converting Gaussian fit to Rayleigh resolution (18 links)
- Optical aberrations (18 links)
- Matlab: Scalebars (17 links)
- Main Page (17 links)
- Optical detectors, noise, and the limit of detection (16 links)
- Physical optics and resolution (16 links)
- Manta G032 camera measurements (16 links)
- Aperture and field stops (16 links)
- MATLAB: Estimating resolution from a PSF slide image (15 links)
- 20.109(F15):Statement on collaboration and integrity (15 links)
- DNA Melting: Simulating DNA Melting - Basics (14 links)
- Spring 2012:LFM (13 links)
- 20.109(S15):Statement on collaboration and integrity (13 links)
- Spring 2012 Bioinstrumentation Project Lab (12 links)
- DNA Melting Thermodynamics (12 links)
- Calculating MSD and Diffusion Coefficients (12 links)
- Understanding log plots (12 links)
- 20.109(F09): System engineering research article (11 links)
- 20.109(F14):Statement on collaboration and integrity (11 links)
- 20.109(F07): Module 3 oral presentations (11 links)
- Optical Microscopy Part 2: Fluorescence Microscopy (10 links)
- Lab Manual: Optical Microscopy (10 links)
- 20.109(F08):Guidelines for writing up your research (10 links)
- Optical Microscopy Part 1: Brightfield Microscopy (10 links)
- Microscopy report outline (10 links)
- Bode plots (10 links)
- 20.109(F09):DNA engineering "Progress Report" (9 links)
- 20.109(S13):Guidelines for writing up your research (9 links)
- 20.109(F17):Research proposal presentation (9 links)
- Impedance Analysis (8 links)
- Optical Microscopy Part 3: Resolution, Stability, and Particle Tracking (8 links)
- Assignment 1, Part 4: Building your transilluminated microscope (8 links)
- 20.109(F11):DNA engineering powerpoint summary (8 links)
- 20.109(F15):Guidelines for writing up your research (8 links)
- 20.109(F12):Guidelines for oral presentations (8 links)
- 20.109(F21):Research article (8 links)
- Electronics Primer (8 links)
- 20.109(F08):DNA engineering lab report guidelines (8 links)
- Electronics primer (8 links)
- 20.109(S08):DNA engineering/Lab report (8 links)
- 20.109(F07):Guidelines for oral presentations (8 links)
- Lab Manual:Measuring DNA Melting Curves (8 links)
- Spring 2012:LFM Proposal (8 links)
- 20.109(F14):Guidelines for oral presentations (8 links)
- 20.109(F11): System engineering research article (8 links)
- Spring 2012:LFM Report (8 links)
- 20.109(F16):Research proposal presentation (8 links)
- 20.109(F14):Guidelines for writing up your research (8 links)
- 20.109(F15):Research proposal presentation (8 links)
- 20.109(F12): System engineering research article (8 links)
- 20.309:Lab Report Guidelines (8 links)
- BEECH(F23):Build Community (7 links)
- Assignment 1, Part 2: Optics bootcamp (7 links)
- 20.109(F14):Module 3 oral presentations (7 links)
- 20.109(F09):DNA engineering "Memo" (7 links)
- 20.109(S16):Journal Club II (Day8) (7 links)
- Spring 2012:LFM Literature (7 links)
- BEECH(F23):Build Knowledge (7 links)
- 20.109(F10):DNA engineering "Progress Report" (7 links)
- Assignment 1, Part 3: Building your transillumination microscope (7 links)
- 20.109(S17):Research proposal presentation (7 links)
- Assignment 2 Part 3: Build an epi-illuminator for your microscope (7 links)
- Assignment 8, Part 3: add flow control and test your device (7 links)
- 20.109(F15):Growth of phage materials (Day1) (7 links)
- 20.109(S15):Guidelines for writing up your research (7 links)
- 20.109(F19):Complete in silico cloning of pdCas9 (Day1) (7 links)
- DNA Melting: Model function and parameter estimation by nonlinear regression (7 links)
- BEECH(F23):Build Your Project (7 links)
- 20.109(S15):Journal club II (Day9) (7 links)
- 20.109(S16):Battery assembly and testing (Day5) (7 links)
- DNA Melting Part 1: Measuring Temperature and Fluorescence (7 links)
- 20.109(S21):M2D1 (7 links)
- BEECH(F23):People (7 links)
- Spring 2012:Leanna Morinishi Journal (7 links)
- 20.109(S18):Research proposal presentation (7 links)
- BEECH(F23): 2023-2024 schedule (7 links)
- 20.109(S12):Prepare RNA by IVT (Day3) (7 links)
- 20.109(F14):Journal club II (Day8) (7 links)
- 20.109(F17):Complete in silico cloning (Day1) (7 links)
- Assignment 1 Overview: Transillumination microscopy (7 links)
- 20.109(F14): System engineering research article (7 links)
- 20.109(F19):Generate gRNA plasmid (Day3) (7 links)
- BEECH(F23) (7 links)
- 20.109(F16):Journal club II (Day 6) (7 links)
- 20.109(S14):Microbiome summary (7 links)
- 20.109(S23):M1D1 (7 links)
- 20.109(F12): M1 ppt summary and notes (7 links)
- 20.109(F17):Design gRNA for CRISPRi (Day2) (7 links)
- 20.109(F17):Journal club II (Day 6) (7 links)
- 20.109(F07): Genome engineering assessment (7 links)
- BEECH(F23):Build Communication Toolkit (7 links)
- Assignment 1, Part 1: Pre-lab questions (7 links)
- Spring 2012: Jonathan Gootenberg Lab 1 (7 links)
- Spring 2012:LFM Documentation (7 links)
- 20.109(F08):Guidelines for oral presentations (7 links)
- 20.109(F22):Laboratory tour (6 links)
- 20.109(F12): Written research pre-proposal (6 links)
- 20.109(S16):TEM (Day4) (6 links)
- 20.109(S19):Journal club presentations (Day7 and 8) (6 links)
- 20.109(S22):Research article (6 links)
- 20.109(S17): Biomaterials engineering mini-report (6 links)
- 20.109(F07): Module 1 oral presentations (6 links)
- Assignment 5, Part 1: MSD difference tracking and microscope stability (6 links)
- 20.109(F11):DNA engineering lab practical (6 links)
- 20.109(F15):Journal Club II (Day8) (6 links)
- 20.109(F09):Guidelines for oral presentations (6 links)
- DNA Melting Part 2: Lock-in Amplifier and Temperature Control (6 links)
- 20.109(F17):Examine sub-nuclear foci abundance to measure DNA damage (Day6) (6 links)
- 20.109(F07):Guidelines for writing a lab report (6 links)
- Spring 2012:Leanna Morinishi (6 links)
- 20.109(F20):M2D2 (6 links)
- 20.109(F16):Generate gRNA plasmid (Day3) (6 links)
- 20.109(F16):Test comet chip loading variables (Day2) (6 links)
- Assignment 5, Part 2: live cell particle tracking of endocytosed beads (6 links)
- Assignment 8 Overview: flow channel & two-color microscope (6 links)
- 20.109(F17):Generate gRNA plasmid (Day3) (6 links)
- 20.109(S20):Enrich candidate clones using fluorescence-activated cell sorter (FACS) (Day1) (6 links)
- Assignment 5 Overview (6 links)
- 20.109(S10):Prepare RNA by IVT (Day3) (6 links)
- 20.109(S12):Guidelines for writing up your research (6 links)
- 20.109(F13): TA notes for module 2 (6 links)
- 20.109(F15): DNA engineering summary (6 links)
- 20.109(F11): Journal Club I (6 links)
- 20.109(F11): Mod 2 Day 1 Testing an engineered biological system (6 links)
- 20.109(S15):Microbiome data summary (6 links)
- 20.109(F12): Journal Club I (6 links)
- DNA Melting: DNA Sequences (6 links)
- 20.109(S21):M2D2 (6 links)
- 20.109(F14): Mod 2 Day 1 Testing an engineered biological system (6 links)
- 20.109(F14): Mod 1 Day 5 Examine candidate clones & tissue culture (6 links)
- 20.109(F11): Journal Club II (6 links)
- 20.109(F15):Purify protein (Day4) (6 links)
- 20.109(F12): Pre-proposal template (6 links)
- 20.109(S16):Cathode construction (Day3) (6 links)
- 20.109(F12): Journal Club II (6 links)
- 20.109(S16):Growth of phage materials (Day1) (6 links)
- Spring 2012:Leanna Morinishi Lab 1 (6 links)
- 20.109(F08):DNA engineering powerpoint pitch guidelines (6 links)
- 20.109(S18):Investigate RNA-seq data using public databases (Day5) (6 links)
- Flat-field correction (6 links)
- 20.109(F16): Biomaterials engineering mini-report (6 links)
- 20.109(F22):M1D5 (6 links)
- 20.109(S14):Guidelines for writing up your research (6 links)
- 20.109(S22):M1D4 (6 links)
- 20.109(F17):Confirm gRNA sequence (Day5) (6 links)
- 20.109(S20):Purify TDP43 protein (Day2) (6 links)
- Spring 2012:Leanna Morinishi Lab 2 (6 links)
- 20.109(S18):Journal club presentations (Day6 and 7) (6 links)
- 20.109(S21):M1D3 (6 links)
- 20.109(F16):Complete in silico cloning (Day1) (6 links)
- 20.109(S17):Journal Club II (Day8) (6 links)
- 20.109(S17):Purification of induced protein (Day2) (6 links)
- 20.109(F22):Research article (6 links)
- 20.109(F14): Journal Club I (6 links)
- 20.109(S15):Research proposal presentation (6 links)
- 20.109(F12): Slides for Journal Club Presentation (6 links)
- 20.109(S22):M1D5 (6 links)
- 20.109(S07):Guidelines for writing a lab report (6 links)
- Spring 2012: Jonathan Gootenberg Journal (6 links)
- 20.109(S18): Biomaterials engineering mini-report (6 links)
- 20.109(F13):Module 3 oral presentations (6 links)
- 20.109(S11):Prepare RNA by IVT (Day3) (6 links)
- 20.109(F13):OWW in 20.109 (6 links)
- 20.109(S23):M1D2 (6 links)
- 20.109(F15):Evaluate mutations and site-directed mutagenesis (Day1) (6 links)
- 20.109(F15):Battery assembly and testing (Day5) (6 links)
- 20.109(F09): Mod 3 Day 6 Oral presentations (6 links)
- 20.109(S16):Site-directed mutagenesis (Day3) (6 links)
- 20.109(S19):Research proposal presentation (6 links)
- 20.109(S07): Expression engineering report (6 links)
- 20.109(F12): Results and Discussion sections (5 links)
- 20.109(S16):Guidelines for writing up your research (5 links)
- 20.109(S12):Purify RNA and run affinity column (Day4) (5 links)
- 20.109(S12): Protein engineering report (5 links)
- 20.109(S13):PCR and paper discussion (Day3) (5 links)
- 20.109(S17):Evaluation of purified protein (Day3) (5 links)
- 20.109(S14):DNA cloning (Day4) (5 links)
- 20.109(S11):Purify RNA and run affinity column (Day4) (5 links)
- Assignment 2 Part 2: Fluorescence microscopy (5 links)
- 20.109(S14):Primer design memo (5 links)
- Assignment 4 part 3: Track microspheres over time (5 links)
- 20.109(F22):M2D1 (5 links)
- 20.109(S14):Module 3 oral presentations (5 links)
- Assignment 8, Part 2: fabricate a microfluidic device (5 links)
- 20.109(S14):Protein-level and wrap-up analysis (Day7) (5 links)
- 20.109(S23):M1D3 (5 links)
- 20.109(F15):FACS analysis (Day7) (5 links)
- 20.109(F15):Induce protein and evaluate DNA (Day3) (5 links)
- 20.109(F15):Cathode construction (Day3) (5 links)
- 20.109(F23):M1D4 (5 links)
- 20.109(F18):Prepare and treat cells for genomic instability experiment (Day3) (5 links)
- 20.109(F19):Complete gamma-H2AX assay and prepare CometChip (Day3) (5 links)
- 20.109(S07): Agarose gel electrophoresis (5 links)
- 20.109(F19):Induce CRISPRi system (Day7) (5 links)
- 20.109(S07): Genome engineering essay (5 links)
- 20.109(F19):Research proposal presentation (5 links)
- 20.109(F17):Evaluate cell loading results (Day3) (5 links)
- DNA Melting: Simulating DNA Melting - Intermediate Topics (5 links)
- Assignment 7 Overview (5 links)
- Assignment 9, Part 1: model function (5 links)
