MODULE
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DATE
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LECTURER
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LABORATORY EXPERIMENTS
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ASSIGNMENTS
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T/W Sep 1/2
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NLL Zoom access Video Slides
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Orientation and laboratory tour T/R Zoom access, T/R prelab video, T/R prelab slides W/F Zoom access, W/F prelab video, W/F prelab slides
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M1D1
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R/F Sep 3/4
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BE Zoom access
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Learn best practices for mammalian cell culture T/R Zoom access, T/R prelab video, T/R prelab slides W/F Zoom access, W/F prelab video, W/F prelab slides
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Orientation quiz Homework due
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M1D2
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T/W Sep 8/9
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BE Zoom access
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Prepare and treat cells for repair foci experiment T/R Zoom access, T/R prelab video, T/R prelab slides W/F Zoom access, W/F prelab video, W/F prelab slides
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Homework due
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M1D3
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R/F Sep 10/11
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BE Zoom access
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Use immunoflourescence staining to assess repair foci experiment T/R Zoom access, T/R prelab video, T/R prelab slides W/F Zoom access, W/F prelab video, W/F prelab slides
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Homework due
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M1D4
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T/W Sep 15/16
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BE Zoom access
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Image repair foci experiment and quantify results T/R Zoom access, T/R prelab video, T/R prelab slides W/F Zoom access, W/F prelab video, W/F prelab slides
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Laboratory quiz Homework due
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M1D5
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R/F Sep 17/18
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BE Zoom access
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Treat cells and perform high-throughput genome damage assay T/R Zoom access, T/R prelab video, T/R prelab slides W/F Zoom access, W/F prelab video, W/F prelab slides
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Homework due
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M1D6
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T/W Sep 22/23
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BE Zoom access
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Image and analyze high-throughput genome damage assay T/R Zoom access, T/R prelab video, T/R prelab slides W/F Zoom access, W/F prelab video, W/F prelab slides
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Homework due
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M1D7
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R/F Sep 24/25
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BE Zoom access
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Complete data analysis using statistical methods T/R Zoom access, T/R prelab video, T/R prelab slides W/F Zoom access, W/F prelab video, W/F prelab slides
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Laboratory quiz Homework due
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M2D1
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T/W Sep 29/30
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JN Zoom access Video Slides
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Complete in silico cloning of protein expression plasmid T/R Zoom access, T/R prelab video, T/R prelab slides W/F Zoom access, W/F prelab video, W/F prelab slides
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Homework due
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M2D2
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R/F Oct 1/2
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JN Zoom access Video Slides
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Perform protein purification protocol W/F Zoom access, W/F prelab video, W/F prelab slides
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Homework due Data Summary draft due Sun, Oct 4 at 10 pm Blog post due Mon, Oct 5 at 10 pm
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M2D3
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T/W Oct 6/7
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JN Zoom access Video Slides
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Assess purity and concentration of purified protein T/R Zoom access, T/R prelab video, T/R prelab slides purification notes W/F Zoom access, W/F prelab video, W/F prelab slides
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Homework due
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M2D4
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R/F Oct 8/9
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JN Zoom access Video Slides
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Prepare small molecule microarray (SMM) slides with purified protein T/R Zoom access, T/R prelab video, T/R prelab slides W/F Zoom access, W/F prelab video, W/F prelab slides
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Laboratory quiz Homework due Mini-presentation due Sun, Oct 11 at 10 pm
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T/W Oct 13/14
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Indigenous Peoples Day holiday
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Data Summary revision due Wed, Oct 14 at 10 pm
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M2D5
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R/F Oct 15/16
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JN Zoom access Video Slides
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Scan SMM slides to identify putative small molecule binders T/R Zoom access, T/R prelab video, T/R prelab slides W/F Zoom access, W/F prelab video, W/F prelab slides
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Homework due
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T/W Oct 20/21
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Journal club presentations
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R/F Oct 22/23
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Journal club presentations
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Blog post due Sun, Oct 25 at 10 pm
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M2D6
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T/W Oct 27/28
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JN Zoom access Video Slides
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Analyze SMM data to confirm putative small molecule binders T/R Zoom access, T/R prelab video, T/R prelab slides W/F Zoom access, W/F prelab video, W/F prelab slides
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Homework due
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M2D7
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R/F Oct 29/30
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JN Zoom access Video Slides
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Examine putative small molecule binders for common features T/R Zoom access, T/R prelab video, T/R prelab slides W/F Zoom access, W/F prelab video, W/F prelab slides
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Laboratory quiz Homework due
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M3D1
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T/W Nov 3/4
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NLL Zoom access Video Slides
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Research project scope and experimental strategy T/R Zoom access, T/R prelab video, T/R prelab slides W/F Zoom access, W/F prelab video, W/F prelab slides
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Homework due
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M3D2
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R/F Nov 5/6
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NLL Zoom access
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Align gRNA sequences with genomic targets T/R Zoom access, [ T/R prelab video], T/R prelab slides W/F Zoom access, [ W/F prelab video], W/F prelab slides
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Homework due
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T/W Nov 10/11
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Veterans day holiday
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Research article due Wed, Nov 11 at 10 pm Blog post due Thu, Nov 12 at 10 pm
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M3D3
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R/F Nov 12/13
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NLL Zoom access
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Analyze ethanol yield data T/R Zoom access, [ T/R prelab video], T/R prelab slides W/F Zoom access, [ W/F prelab video], W/F prelab slides
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Laboratory quiz Homework due
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T/W Nov 17/18
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Research proposal pitches Zoom access
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Develop Research proposal ideas and presentations T/R Zoom access W/F Zoom access
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M3D4
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R/F Nov 19/20
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NLL Zoom access
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Examine features in gRNA-targeted genomic sequences T/R Zoom access, [ T/R prelab video], T/R prelab slides W/F Zoom access, [ W/F prelab video], W/F prelab slides
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Homework due
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T/W Nov 24/25
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Thanksgiving holiday
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R/F Nov 26/27
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Thanksgiving holiday
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M3D5
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T/W Dec 1/2
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NLL Zoom access
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Design optimized gRNA sequence for enhanced ethanol production T/R Zoom access, [ T/R prelab video], T/R prelab slides W/F Zoom access, [ W/F prelab video], W/F prelab slides
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Laboratory quiz Homework due
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R/F Dec 3/F
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Research proposal presentations
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Blog post due Fri, Dec 4 at 10 pm
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T Dec 8
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Feedback session Zoom access
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Mini-report due Mon, Dec 7 at 10 pm
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