Difference between revisions of "20.109(F10): Fall 2010 schedule"
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| | | | ||
| Thur Sept 9 | | Thur Sept 9 | ||
− | | [ | + | | [http://openwetware.org/wiki/Natalie_Kuldell | NK] |
| | | | ||
| [[20.109(F10):Lab tour | Orientation]] | | [[20.109(F10):Lab tour | Orientation]] | ||
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| 1 | | 1 | ||
| Tue Sept 14 | | Tue Sept 14 | ||
− | | [ | + | | [http://openwetware.org/wiki/Natalie_Kuldell | NK] and [http://openwetware.org/wiki/User:Michelle_R._Sukup_Jackson | MSJ] |
| JG | | JG | ||
| [[20.109(F10): Mod 1 Day 1 DNA engineering using PCR | DNA engineering using PCR]] | | [[20.109(F10): Mod 1 Day 1 DNA engineering using PCR | DNA engineering using PCR]] | ||
Line 31: | Line 31: | ||
| 2 | | 2 | ||
| Thur Sept 16 | | Thur Sept 16 | ||
− | | [ | + | | [http://openwetware.org/wiki/User:Michelle_R._Sukup_Jackson | MSJ] |
| JG | | JG | ||
|[[20.109(F10): Mod 1 Day 2 Clean and cut DNA | Clean and cut DNA]] | |[[20.109(F10): Mod 1 Day 2 Clean and cut DNA | Clean and cut DNA]] | ||
Line 39: | Line 39: | ||
| 3 | | 3 | ||
| Tue Sept 21 | | Tue Sept 21 | ||
− | | [ | + | | [http://openwetware.org/wiki/Natalie_Kuldell | NK] and [http://web.mit.edu/be/people/wittrup.shtml DW] |
| JG | | JG | ||
| [[20.109(F10): Mod 1 Day 3 Agarose gel electrophoresis| Agarose gel electrophoresis]] | | [[20.109(F10): Mod 1 Day 3 Agarose gel electrophoresis| Agarose gel electrophoresis]] | ||
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| 4 | | 4 | ||
| Thur Sept 23 | | Thur Sept 23 | ||
− | | [ | + | | [http://openwetware.org/wiki/User:Orsolya_Kiraly | OK] |
| JG | | JG | ||
| [[20.109(F10): Mod 1 Day 4 DNA ligations and bacterial transformations| DNA ligation and bacterial transformation]] | | [[20.109(F10): Mod 1 Day 4 DNA ligations and bacterial transformations| DNA ligation and bacterial transformation]] | ||
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| 5 | | 5 | ||
| Tue Sept 28 | | Tue Sept 28 | ||
− | | [ | + | | [http://openwetware.org/wiki/User:Orsolya_Kiraly | OK] |
| JG | | JG | ||
| [[20.109(F10): Mod 1 Day 5 Examine candidate clones| Examine candidate clones]] | | [[20.109(F10): Mod 1 Day 5 Examine candidate clones| Examine candidate clones]] | ||
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| 6 | | 6 | ||
| Thur Sept 30 | | Thur Sept 30 | ||
− | | [ | + | | [http://openwetware.org/wiki/User:Orsolya_Kiraly | OK] |
| JG | | JG | ||
− | | [ | + | | [http://openwetware.org/wiki/20.109(F10):_Mod_1_Day_6_Restriction_map_and_tissue_culture | Restriction map and tissue culture] |
| [[Media:20.109(F10) M1D6 lecture.pdf| M1D6 lecture slides]]<br> [[Media:20.109(F10) M1D6 labtalk.pdf| M1D6 lab lecture]]<br> Neal/Linda visit lab for peer review exercise<br> | | [[Media:20.109(F10) M1D6 lecture.pdf| M1D6 lecture slides]]<br> [[Media:20.109(F10) M1D6 labtalk.pdf| M1D6 lab lecture]]<br> Neal/Linda visit lab for peer review exercise<br> | ||
|-- | |-- | ||
Line 73: | Line 73: | ||
| [http://web.mit.edu/be/people/wittrup.shtml DW] | | [http://web.mit.edu/be/people/wittrup.shtml DW] | ||
| JG | | JG | ||
− | | [ | + | | [http://openwetware.org/wiki/20.109(F10):_Mod_1_Day_7_Lipofection | Lipofection] |
− | | '''[[20.109(F10):DNA engineering "Progress Report"| Mod 1 "progress report"]] due by 11AM today''' <br>[[Media:20.109(F10) M1D7 lecture.pdf| M1D7 lecture slides]][[Media:BackgroundPapers Stats.pdf| and stats papers]]<br>[[Media:20.109(F10) M1D7 labtalk.ppt| M1D7 lab talk]]<br>[[Media:20.109(F10) M1D7 109StatsExercises.pptx | M1D7 lab stats talk]] | + | | '''[[20.109(F10):DNA engineering "Progress Report"| Mod 1 "progress report"]] due by 11AM today''' <br>[[Media:20.109(F10) M1D7 lecture.pdf| M1D7 lecture slides]][[Media:BackgroundPapers Stats.pdf| and stats papers]]<br>[[Media:20.109(F10) M1D7 labtalk.ppt| M1D7 lab talk]]<br>[[Media:20.109(F10) M1D7 109StatsExercises.pptx | M1D7 lab stats talk pptx]][[Media:20.109(F10) M1D7 109StatsExercises.pdf| and as pdf]] |
|-- | |-- | ||
| 1 | | 1 | ||
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| [http://web.mit.edu/be/people/wittrup.shtml DW] | | [http://web.mit.edu/be/people/wittrup.shtml DW] | ||
| JG | | JG | ||
− | | [ | + | | [http://openwetware.org/wiki/20.109(F10):_Mod_1_Day_8_FACS_analysis | FACS analysis] |
| [[Media:20.109(F10) M1D8 lecture.pdf| M1D8 lecture slides]] | | [[Media:20.109(F10) M1D8 lecture.pdf| M1D8 lecture slides]] | ||
|-- | |-- | ||
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| | | | ||
! colspan="4" | Columbus Day Break Monday Oct 11 | ! colspan="4" | Columbus Day Break Monday Oct 11 | ||
− | | '''No lab Tuesday, but [ | + | | '''No lab Tuesday, but [http://openwetware.org/wiki/20.109(F10):DNA_engineering_"P3" | Mod 1 "P3"] is due by 11AM 10.13.10''' |
|-- | |-- | ||
| colspan="7" | | | colspan="7" | | ||
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| 1 | | 1 | ||
| Thurs Oct 14 | | Thurs Oct 14 | ||
− | | [ | + | | [http://openwetware.org/wiki/Natalie_Kuldell | NK] |
− | | [ | + | | [http://openwetware.org/wiki/User:Mark_B._Smith | MS] |
| [[20.109(F10): Mod 2 Day 1 Testing an engineered biological system| Testing an engineered biological system]] | | [[20.109(F10): Mod 2 Day 1 Testing an engineered biological system| Testing an engineered biological system]] | ||
− | | | + | | [[Media:20.109(F10) M2D1 Handout.pdf| M2D1 lecture handout]]<br>[[Media:20.109(F10) M1D1 LabTalk.pptx| M2D1 lab slides]] |
|-- | |-- | ||
| 2 | | 2 | ||
| 2 | | 2 | ||
| Tues Oct 19 | | Tues Oct 19 | ||
− | | [ | + | | [http://openwetware.org/wiki/Natalie_Kuldell | NK] |
− | | [ | + | | [http://openwetware.org/wiki/User:Mark_B._Smith | MS] |
− | | [ | + | | [http://openwetware.org/wiki/20.109(F10):_Mod_2_Day_2_Measuring_system_performance | Measuring System Performance] |
− | | | + | | [[Media:20.109(F10) M2D2 handout.pdf| M2D2 lecture handout]] <br> [[Media:20.109(F10) M2D2 labtalk.pptx| M2D2 lab slides]] |
|-- | |-- | ||
| 2 | | 2 | ||
| 3 | | 3 | ||
| Thurs Oct 21 | | Thurs Oct 21 | ||
− | | [ | + | | [http://openwetware.org/wiki/Natalie_Kuldell | NK] |
− | | [ | + | | [http://openwetware.org/wiki/User:Mark_B._Smith | MS] |
− | | [ | + | | [http://openwetware.org/wiki/20.109(F10):_Mod_2_Day_3_Tools_for_system_engineering | Tools for System Engineering] |
− | | | + | | [[Media:20.109(F10) M2D3 handout.pdf| M2D3 lecture handout]]<br> [[Media:20.109(F10) M2D3 labtalk.pptx| M2D3 lab slides]] |
|-- | |-- | ||
| 2 | | 2 | ||
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| Tues Oct 26 | | Tues Oct 26 | ||
| Journal Club | | Journal Club | ||
− | | [ | + | | [http://openwetware.org/wiki/User:Mark_B._Smith | MS] |
− | | [ | + | | [http://openwetware.org/wiki/20.109(F10):_Journal_Club_I | Journal Club I] |
− | | We'll be | + | | We'll be having lecture at the regular time/place and then meeting in the lab for a few minutes starting at 1. |
|- | |- | ||
| 2 | | 2 | ||
| 5 | | 5 | ||
| Thurs Oct 28 | | Thurs Oct 28 | ||
− | | [ | + | | [http://openwetware.org/wiki/Natalie_Kuldell | NK] |
− | | [ | + | | [http://openwetware.org/wiki/User:Mark_B._Smith | MS] |
− | | [ | + | | [http://openwetware.org/wiki/20.109(F10):_Mod_2_Day_5_Assessing_re-tuned_system | Assessing re-tuned system] |
− | | | + | | Neal and Linda visit lab for IMRD training<br>[[Media:20.109(F10) M2D5 handout.pdf| M2D5 lecture handout]] |
|-- | |-- | ||
| 2 | | 2 | ||
| 6 | | 6 | ||
| Tues Nov 2 | | Tues Nov 2 | ||
− | | [ | + | | [http://openwetware.org/wiki/Natalie_Kuldell | NK] |
− | | [ | + | | [http://openwetware.org/wiki/User:Mark_B._Smith | MS] |
− | | [ | + | | [http://openwetware.org/wiki/20.109(F10):_Mod_2_Day_6_Readouts_of_DNA,_Protein | Readout: DNA] |
− | | | + | | [[Media:20.109(F10) M2D6 handout.pdf| M2D6 lecture handout]] |
|-- | |-- | ||
| 2 | | 2 | ||
| 7 | | 7 | ||
| Thurs Nov 4 | | Thurs Nov 4 | ||
− | | [ | + | | [http://openwetware.org/wiki/Natalie_Kuldell | NK] |
− | | [ | + | | [http://openwetware.org/wiki/User:Mark_B._Smith | MS] |
| [[20.109(F10): Mod 2 Day 7 Readout of Protein | Readout: Protein]] | | [[20.109(F10): Mod 2 Day 7 Readout of Protein | Readout: Protein]] | ||
− | | Bring your writing and your questions by the lab as needed | + | | [[Media:20.109(F10) M2D7 handout.pdf| M2D7 lecture handout]]<br>Bring your writing and your questions by the lab as needed |
|-- | |-- | ||
| 2 | | 2 | ||
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| Tues Nov 9 | | Tues Nov 9 | ||
| Journal Club | | Journal Club | ||
− | |[ | + | |[http://openwetware.org/wiki/User:Mark_B._Smith | MS] |
− | | [ | + | | [http://openwetware.org/wiki/20.109(F10):_Journal_Club_I I| Journal Club II] |
| | | | ||
|-- | |-- | ||
Line 169: | Line 169: | ||
| 1 | | 1 | ||
| Tues Nov 16 | | Tues Nov 16 | ||
− | | [ | + | | [http://openwetware.org/wiki/User:Abelcher | AB] |
− | | [ | + | | [http://openwetware.org/wiki/User:JCasey4 | JC] |
− | | [ | + | | [http://openwetware.org/wiki/20.109(F10):_Mod_3_Day_1_Growth_of_phage_materials | Growth of phage materials] |
− | | | + | | [[Media:20.109(F10) M3D1 lablecture.pptx| M3D1 lab lecture]] |
|-- | |-- | ||
| 3 | | 3 | ||
| 2 | | 2 | ||
| Thurs Nov 18 | | Thurs Nov 18 | ||
− | | [ | + | | [http://openwetware.org/wiki/User:Abelcher | AB] |
− | | [ | + | | [http://openwetware.org/wiki/User:JCasey4 | JC] |
− | | [ | + | | [http://openwetware.org/wiki/20.109(F10):_Mod_3_Day_2_Phage_nanowires | Phage nanowires] |
| | | | ||
|-- | |-- | ||
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| 3 | | 3 | ||
| Tues Nov 23 | | Tues Nov 23 | ||
− | | [ | + | | [http://openwetware.org/wiki/User:Abelcher | AB] |
− | | [ | + | | [http://openwetware.org/wiki/User:JCasey4 | JC] |
− | | [ | + | | [http://openwetware.org/wiki/20.109(F10):_Mod_3_Day_3_TEM | TEM] |
| | | | ||
|-- | |-- | ||
Line 202: | Line 202: | ||
| 4 | | 4 | ||
| Tues Nov 30 | | Tues Nov 30 | ||
− | | [ | + | | [http://openwetware.org/wiki/User:Abelcher | AB] |
− | | [ | + | | [http://openwetware.org/wiki/User:JCasey4 | JC] |
− | | [ | + | | [http://openwetware.org/wiki/20.109(F10):_Mod_3_Day_4_Battery_assembly | Battery assembly] |
− | | Atissa will visit lab to offer tips for giving talks with a partner<br> | + | | [[Media:20.109 Battery Lecture, 30NOV10.pptx| John's lecture slides]]<br>[[Media:20.109(F10) M3D4 lab.pdf| M3D4 lab lecture]]<br>Atissa will visit lab @4PM to offer tips for giving talks with a partner<br> |
|-- | |-- | ||
| 3 | | 3 | ||
| 5 | | 5 | ||
| Thurs Dec 2 | | Thurs Dec 2 | ||
− | | [ | + | | [http://openwetware.org/wiki/User:Abelcher | AB] |
− | | [ | + | | [http://openwetware.org/wiki/User:JCasey4 | JC] |
− | | [ | + | | [http://openwetware.org/wiki/20.109(F10):_Mod_3_Day_5_Battery_testing | Battery testing] |
| | | | ||
|-- | |-- | ||
Line 218: | Line 218: | ||
| 6 | | 6 | ||
| Tues Dec 7 | | Tues Dec 7 | ||
− | | [ | + | | [http://openwetware.org/wiki/User:Abelcher | AB] |
− | | [ | + | | [http://openwetware.org/wiki/User:JCasey4 | JC] |
| [[20.109(F10): Mod 3 Day 6 Oral presentations| Research proposal presentations]] | | [[20.109(F10): Mod 3 Day 6 Oral presentations| Research proposal presentations]] | ||
| We'll start this day in lab, 56-322, to finish off the BioMaterials module <br> | | We'll start this day in lab, 56-322, to finish off the BioMaterials module <br> | ||
Line 229: | Line 229: | ||
| | | | ||
| end of term celebration... | | end of term celebration... | ||
− | | Lecture for class evaluations then lunch from | + | | Lecture for class evaluations then lunch from 11:30-1 PM, 56-614, no lab |
|} | |} | ||
</div> | </div> |
Latest revision as of 21:00, 28 July 2015
MODULE | DAY | DATE | LECTURER | TA | LAB | note |
Thur Sept 9 | NK] | Orientation | Orientation Handout Fall 2010 | |||
1 | 1 | Tue Sept 14 | NK] and | MSJ | JG | DNA engineering using PCR | M1D1 lecture handout M1D1 lab talk |
1 | 2 | Thur Sept 16 | MSJ] | JG | Clean and cut DNA | Neal/Linda/Atissa visit lab their slides are here M1D2 lecture handout M1D2 lab talk |
1 | 3 | Tue Sept 21 | NK] and DW | JG | Agarose gel electrophoresis | NK M1D3 lecture and DW M1D3 lecture and M1D3 lab talk |
1 | 4 | Thur Sept 23 | OK] | JG | DNA ligation and bacterial transformation | M1D4 lecture slides M1D4 lab lecture |
1 | 5 | Tue Sept 28 | OK] | JG | Examine candidate clones | M1D5 lecture slides M1D5 lab lecture EHS visits lab |
1 | 6 | Thur Sept 30 | OK] | JG | Restriction map and tissue culture] | M1D6 lecture slides M1D6 lab lecture Neal/Linda visit lab for peer review exercise |
1 | 7 | Tue Oct 5 | DW | JG | Lipofection] | Mod 1 "progress report" due by 11AM today M1D7 lecture slides and stats papers M1D7 lab talk M1D7 lab stats talk pptx and as pdf |
1 | 8 | Thur Oct 7 | DW | JG | FACS analysis] | M1D8 lecture slides |
Columbus Day Break Monday Oct 11 | Mod 1 "P3"] is due by 11AM 10.13.10 | |||||
---|---|---|---|---|---|---|
2 | 1 | Thurs Oct 14 | NK] | MS] | Testing an engineered biological system | M2D1 lecture handout M2D1 lab slides |
2 | 2 | Tues Oct 19 | NK] | MS] | Measuring System Performance] | M2D2 lecture handout M2D2 lab slides |
2 | 3 | Thurs Oct 21 | NK] | MS] | Tools for System Engineering] | M2D3 lecture handout M2D3 lab slides |
2 | 4 | Tues Oct 26 | Journal Club | MS] | Journal Club I] | We'll be having lecture at the regular time/place and then meeting in the lab for a few minutes starting at 1. |
2 | 5 | Thurs Oct 28 | NK] | MS] | Assessing re-tuned system] | Neal and Linda visit lab for IMRD training M2D5 lecture handout |
2 | 6 | Tues Nov 2 | NK] | MS] | Readout: DNA] | M2D6 lecture handout |
2 | 7 | Thurs Nov 4 | NK] | MS] | Readout: Protein | M2D7 lecture handout Bring your writing and your questions by the lab as needed |
2 | 8 | Tues Nov 9 | Journal Club | MS] | Journal Club II] | |
Veteran's Day Break Thurs Nov 11 | Mod 2 research article is due by 11:59PM on 11.11.10 | |||||
3 | 1 | Tues Nov 16 | AB] | JC] | Growth of phage materials] | M3D1 lab lecture |
3 | 2 | Thurs Nov 18 | AB] | JC] | Phage nanowires] | |
3 | 3 | Tues Nov 23 | AB] | JC] | TEM] | |
Thanksgiving Break Nov 25, 26 | No lab or lecture | |||||
3 | 4 | Tues Nov 30 | AB] | JC] | Battery assembly] | John's lecture slides M3D4 lab lecture Atissa will visit lab @4PM to offer tips for giving talks with a partner |
3 | 5 | Thurs Dec 2 | AB] | JC] | Battery testing] | |
3 | 6 | Tues Dec 7 | AB] | JC] | Research proposal presentations | We'll start this day in lab, 56-322, to finish off the BioMaterials module |
Thurs Dec 9 | end of term celebration... | Lecture for class evaluations then lunch from 11:30-1 PM, 56-614, no lab |