Difference between revisions of "20.109(S24):Spring 2024 schedule"

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| T/W Apr 2/3
 
| T/W Apr 2/3
 
| [http://be.mit.edu/directory/angela-belcher AB] <br>  
 
| [http://be.mit.edu/directory/angela-belcher AB] <br>  
| [[20.109(S24):M2D4 |Confirm peptide sequences and identify additional peptides for testing]] <br>  
+
| [[20.109(S24):M2D4 |Align sequencing and perform flow cytometry]] <br>  
 
| <font color= #3bc2b6 >'''Laboratory quiz'''</font color> <br> [[20.109(S24):Homework#Due_M2D4|Homework due]]  
 
| <font color= #3bc2b6 >'''Laboratory quiz'''</font color> <br> [[20.109(S24):Homework#Due_M2D4|Homework due]]  
 
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| T/W Apr 9/10
 
| T/W Apr 9/10
 
| [http://be.mit.edu/directory/becky-meyer BCM] <br>  
 
| [http://be.mit.edu/directory/becky-meyer BCM] <br>  
| [[20.109(S24):M2D5 | Quantify cadmium removal from media by engineered yeast]] <br>  
+
| [[20.109(S24):M2D5 | Flow cytometry analysis]] <br>  
 
| [[20.109(S24):Homework#Due_M2D5|Homework due]]  
 
| [[20.109(S24):Homework#Due_M2D5|Homework due]]  
 
|--
 
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| R/F Apr 11/12
 
| R/F Apr 11/12
 
| [http://be.mit.edu/directory/angela-belcher AB] <br>  
 
| [http://be.mit.edu/directory/angela-belcher AB] <br>  
| [[20.109(S24):M2D6 | Visualize cadmium sequestration by engineered peptides]] <br>  
+
| [[20.109(S24):M2D6 | Quantify cadmium removal from media]] <br>  
 
| [[20.109(S24):Homework#Due_M2D5|Homework due]]   
 
| [[20.109(S24):Homework#Due_M2D5|Homework due]]   
 
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| R/F Apr 18/19
 
| R/F Apr 18/19
 
| [http://be.mit.edu/directory/becky-meyer BCM] <br>  
 
| [http://be.mit.edu/directory/becky-meyer BCM] <br>  
| [[20.109(S24):M2D7 | Assess quality of cadmium sulfide production by engineered yeast]] <br>  
+
| [[20.109(S24):M2D7 | Visualize cadmium sequestration and assess quality of cadmium sulfide production]] <br>  
 
| [[20.109(S24):Homework#Due_M2D7|Homework due]]
 
| [[20.109(S24):Homework#Due_M2D7|Homework due]]
 
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Revision as of 15:40, 6 December 2023

20.109(S24): Laboratory Fundamentals of Biological Engineering

Sp24 banner image.png

Spring 2024 schedule        FYI        Assignments        Homework        Class data        Communication        Accessibility

       M1: Drug discovery        M2: Protein engineering        M3: Project design       


Welcome to 20.109! It is our goal to make this class a useful and fun introduction to the experiments and techniques used in biological engineering. Though there is not enough time to show you everything needed to do research, after this class you will feel confident and familiar with some fundamental experimental approaches and laboratory protocols. You will develop good habits at the bench, which will increase the likelihood of success in your work and ensure the health and safety of you and your labmates. By the end of the semester, you will also be well-versed in good scientific practices - through your experience with scientific writing, notebook keeping, and orally presenting data and novel ideas. All of us involved in teaching 20.109 hope you will find it a satisfying challenge and an exciting experience that has lasting value.

SCHEDULE DETAILS:
Lecture times: Tuesday (T) and Thursday (R) 11 - 12 pm in 1-390
Laboratory section times: Tuesday (T) and Thursday (R) 1 - 5 pm or Wednesday (W) and Friday (F) 1 - 5 pm in 56-322

ABSENCE POLICY:
Absences from lecture: Attendance will be recorded for participation points throughout the semester. If absent, student is responsible for all information provided in lecture.
Absences from laboratory: Excused absences should be discussed with the Instructors as soon as possible. Because make-up laboratory time is not provided, attendance in another section may be required to complete the necessary experiments. Unexcused absences will result in a 1/3 of a letter grade deduction from the final grade on the major assignment for the module (for example, a B+ would become a B).

MODULE DATE LECTURER LABORATORY EXPERIMENTS ASSIGNMENTS
T/W Feb 6/7 NLL
Orientation and laboratory tour
M1D1 R/F Feb 8/9 AK
Placeholder
Orientation quiz
Homework due
M1D2 T/W Feb 13/14 AK
Placeholder
Homework due
M1D3 R/F Feb 15/16 AK
Placeholder
Homework due
T/W Feb 20/21 President's Day holiday
M1D4 R/F Feb 22/23 AK
Placeholder
Laboratory quiz
Homework due
M1D5 T/W Feb 27/28 AK
Placeholder
Homework due
M1D6 R/F Feb/Mar 29/1 AK
Placeholder
Homework due
Research talk due Sat, Mar X at 10pm
M1D7 T/W Mar 5/6 AK
Placeholder
Homework due
M1D8 R/F Mar 7/8 BE Comm Lab
Placeholder
Laboratory quiz
Homework due
M2D1 T/W Mar 12/13 AB
Determine peptide design strategy
Homework due
M2D2 R/F Mar 14/15 AB
Clone cell surface peptide display vector
Homework due
Data Summary draft due Sat, Mar X at 10 pm
[ Blog post due] Mon, Mar X at 10 pm
M2D3 T/W Mar 19/20 AB
Sequence clones and transform into yeast
Homework due
M2D4 T/W Apr 2/3 AB
Align sequencing and perform flow cytometry
Laboratory quiz
Homework due
T/W Mar 26/27 - R/F Mar 28/29 Spring Break Data Summary revision due Mon, Mar X at 10 pm
R/F Mar 21/22 Journal article presentations
R/F Apr 4/5 Journal article presentations [ Blog post due] Sat, Apr X at 10 pm
M2D5 T/W Apr 9/10 BCM
Flow cytometry analysis
Homework due
M2D6 R/F Apr 11/12 AB
Quantify cadmium removal from media
Homework due
T/W Apr 16/17 Patriots' Day holiday
M2D7 R/F Apr 18/19 BCM
Visualize cadmium sequestration and assess quality of cadmium sulfide production
Homework due
M2D8 T/W Apr 23/24 BE Comm Lab
Complete data analysis and organize Research Article figures
Laboratory quiz
Homework due
M3D1 R/F Apr 25/26 Brainstorm ideas for Research proposal presentation
Homework due
M3D2 T/W Apr/May 30/1 Pitch research proposal presentation ideas
Research article due Mon, May X at 10 pm
[ Blog post due] Tue, May X at 10 pm
M3D3 R/F May 2/3 BE Comm Lab Develop ideas for Research proposal presentation
Homework due
M3D4 T/W May 7/8 Participate in Research proposal peer reviews
Homework due
R/F May 9/10 Research proposal presentations [ Blog post due] Sat, May X at 10 pm
T May 14 Celebration lunch!