20.109(F07): Fall 2007 schedule

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20.109(F07): Laboratory Fundamentals of Biological Engineering

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Home        People        Schedule Fall 2007        Assignments        Lab Basics        OWW Basics       
Genome Engineering        Expression Engineering        Biomaterials Engineering              

MODULE DAY DATE LECTURER TA LAB note
Thur Sept 6 NK] AL] Orientation notes from the first lecture are here
1 1 Tue Sept 11 DE] LAV] Start-up genome engineering] PDF copy of notes from discussion are here
1 2 Thur Sept 13 DE] LAV] Agarose gel electrophoresis] PDF copy of notes from discussion are here
1 3 Tue Sept 18 DE] LAV] DNA ligation and bacterial transformation PDF copy of notes from discussion are here
1 4 Thur Sept 20 DE] LAV] Examine candidate clones] PDF copy of slides from discussion are here
1 5 Tue Sept 25 DE] LAV] M13.1 PDF copy of slides from discussion are here (In lab we will hear from | the oral presenation instructor)
1 6 Thur Sept 27 DE] LAV] Western analysis PDF copy of slides from discussion are here
1 7 Tue Oct 2 DE] LAV] Probe western] the first draft of your genome engineering portfolio Parts 1, 2, and 4 only is due before you arrive in lab. During lab there will be a lecture from the EHS representative. PDF copy of slides from discussion are here.
1 8 Thur Oct 4 DE] LAV] Oral Presentations the first draft of your genome engineering portfolio Part 3 only is due before you arrive in lab.
Columbus Day Break Oct 8,9 No lab Tuesday and Wednesday
2 1 Thur Oct 11 NK] AL] siRNA design and start-up in cell culture PDF copy of lecture slides are here
2 2 Tue Oct 16 NK] AL] Transfection PDF copy of lecture slides are here
2 3 Thur Oct 18 NK] AL] Luciferase assays and RNA prep PDF copy of lecture slides are here
2 4 Tues Oct 23 NK] AL] Journal article discussion NL] from the writing program.
PDF of his slides are on his user page as well as here (overview) and

here (Guide to Scientific Writing)

2 5 Thur Oct 25 NK] AL] cDNA synthesis and microarray PDF copy of lecture slides are here
2 6 Tue Oct 30 NK] AL] Microarray data analysis guest lecture by Rebecca Fry
PDF of her lecture slides are here
2 7 Thur Nov 1 NK] AL] Lecture on high throughput technologies; no lab First draft of your expression engineering report is due by 5PM on the day you meet for lab.
PDF copy of lecture slides are here
2 8 Tue Nov 6 NK] AL] Oral presentations No lecture 11.06
Presentations will be in 56-302 for November 6th,
56-402 for November 7th
3 1 Thur Nov 8 AB] RB] Growth of phage materials
3 2 Tue Nov 13 AB] RB] Phage nanowires] PDF copy of Atissa Bunuazizi's lecture is here
3 3 Thur Nov 15 AB] RB] TEM PDF copy of Yoon Sung Nam's lecture is here
Thanksgiving Break Nov 22-33 No lab or lecture all week
3 4 Tue Nov 27 AB] RB] Phage by design
3 5 Thur Nov 29 AB] RB] Phage by design, pt 2
3 6 Tue Dec 4 AB] RB] ECD assembly
3 7 Thur Dec 6 AB] RB] Oral presentations 56-302 on Thurs, December 6th
56-402 on Friday, December 7th
3 8 Tue Dec 11 AB] RB] end of term celebration... Lecture, no lab, for class evaluations then lunch from noon-1:30 PM, 32-G449