Difference between revisions of "20.109(S14): Spring 2014 schedule"
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| Tue/Wed Feb 4/5 | | Tue/Wed Feb 4/5 | ||
− | | [ | + | | [http://openwetware.org/wiki/User:AgiStachowiak | ANS] |
− | | [ | + | | [http://openwetware.org/wiki/User:Christopher_Bandoro | Chris] |
| [[20.109(S14):Lab tour | Orientation]] | | [[20.109(S14):Lab tour | Orientation]] | ||
| [[Media:20.109 OrientLect(S14).pdf | Introductory Lecture (PDF)]]<br>[[Media:M1D0_F14_SKH_prelab_final.pdf | T/R Pre-Lab]]<br>[[Media:S14_D0-ANS.pdf| W/F Pre-Lab]] | | [[Media:20.109 OrientLect(S14).pdf | Introductory Lecture (PDF)]]<br>[[Media:M1D0_F14_SKH_prelab_final.pdf | T/R Pre-Lab]]<br>[[Media:S14_D0-ANS.pdf| W/F Pre-Lab]] | ||
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| Thur/Fri Feb 6/7 | | Thur/Fri Feb 6/7 | ||
| [http://web.mit.edu/be/people/runstadler.shtml JR] | | [http://web.mit.edu/be/people/runstadler.shtml JR] | ||
− | | [ | + | | [http://openwetware.org/wiki/User:Christopher_Bandoro | Chris] |
| [[20.109(S14):Microbial DNA extraction (Day1) | Microbial DNA extraction]] | | [[20.109(S14):Microbial DNA extraction (Day1) | Microbial DNA extraction]] | ||
|<font color=green>lab orientation quiz</font color><br>[[Media:S14_M1D1-Lecture.pdf | Lecture]]<br>[[Media: S14M1-JonR_Lecture1_Outline.doc | L1 Notes]]<br>[[Media:M1D1_S14_lab_SKH_final.pdf | T/R Pre-Lab]] <br>[[Media:S14_M1D1-ANS.pdf | W/F Pre-Lab]] | |<font color=green>lab orientation quiz</font color><br>[[Media:S14_M1D1-Lecture.pdf | Lecture]]<br>[[Media: S14M1-JonR_Lecture1_Outline.doc | L1 Notes]]<br>[[Media:M1D1_S14_lab_SKH_final.pdf | T/R Pre-Lab]] <br>[[Media:S14_M1D1-ANS.pdf | W/F Pre-Lab]] | ||
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| Tue/Wed Feb 11/12 | | Tue/Wed Feb 11/12 | ||
| [http://web.mit.edu/be/people/runstadler.shtml JR] | | [http://web.mit.edu/be/people/runstadler.shtml JR] | ||
− | | [ | + | | [http://openwetware.org/wiki/User:Christopher_Bandoro | Chris] |
| [[20.109(S14):Diagnostic primer design (Day2) | Diagnostic primer design]] | | [[20.109(S14):Diagnostic primer design (Day2) | Diagnostic primer design]] | ||
| [[Media:S14_M1D2-Lecture.pdf | Lecture]]<br>[[Media: S14M1-JonR_Lecture2_Outline.doc | L2 Notes]]<br>[[Media:M1D2_S14_SKH_final.pdf | T/R Pre-lab]]<br>[[Media:S14_M1D2-ANS.pdf | W/F Pre-Lab]] | | [[Media:S14_M1D2-Lecture.pdf | Lecture]]<br>[[Media: S14M1-JonR_Lecture2_Outline.doc | L2 Notes]]<br>[[Media:M1D2_S14_SKH_final.pdf | T/R Pre-lab]]<br>[[Media:S14_M1D2-ANS.pdf | W/F Pre-Lab]] | ||
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| Thur/Fri Feb 13/14 | | Thur/Fri Feb 13/14 | ||
| [http://web.mit.edu/be/people/runstadler.shtml JR] | | [http://web.mit.edu/be/people/runstadler.shtml JR] | ||
− | | [ | + | | [http://openwetware.org/wiki/User:Christopher_Bandoro | Chris] |
| [[20.109(S14):16S PCR and paper discussion (Day3)| 16S PCR and paper discussion]] | | [[20.109(S14):16S PCR and paper discussion (Day3)| 16S PCR and paper discussion]] | ||
| <font color=green>lab quiz</font color><br>[[Media:S14_M1D3-Lecture.pdf | Lecture]]<br>[[Media: S14M1-JonR_Lecture3_Outline.docx | L3 Notes]]<br>[[Media:M1D3_S14_SKH_final.pdf | T/R Pre-lab]]<br>[[Media:S14_M1D3-ANS.pdf | W/F Pre-Lab]]<br>[[Media:20.109_Presentation-basics_S14_Atissa.pdf | WAC lecture, talks]] | | <font color=green>lab quiz</font color><br>[[Media:S14_M1D3-Lecture.pdf | Lecture]]<br>[[Media: S14M1-JonR_Lecture3_Outline.docx | L3 Notes]]<br>[[Media:M1D3_S14_SKH_final.pdf | T/R Pre-lab]]<br>[[Media:S14_M1D3-ANS.pdf | W/F Pre-Lab]]<br>[[Media:20.109_Presentation-basics_S14_Atissa.pdf | WAC lecture, talks]] | ||
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| Thur/Fri Feb 20/21 | | Thur/Fri Feb 20/21 | ||
| [http://web.mit.edu/be/people/runstadler.shtml JR] | | [http://web.mit.edu/be/people/runstadler.shtml JR] | ||
− | | [ | + | | [http://openwetware.org/wiki/User:Christopher_Bandoro | Chris] |
| [[20.109(S14):DNA cloning (Day4)| DNA cloning]] | | [[20.109(S14):DNA cloning (Day4)| DNA cloning]] | ||
| [[Media: S14M1-JonR_Lecture4_Outline.doc | L4 Notes]]<br>[[Media:M1D4_S14_SKH_final.pdf | T/R Pre-lab]]<br>[[Media:S14_M1D4-ANS.pdf | W/F Pre-Lab]]<br>[[Media:20.109_FIG_CAPTIONS_S14_Marilee.pdf | WAC lecture, figures]] | | [[Media: S14M1-JonR_Lecture4_Outline.doc | L4 Notes]]<br>[[Media:M1D4_S14_SKH_final.pdf | T/R Pre-lab]]<br>[[Media:S14_M1D4-ANS.pdf | W/F Pre-Lab]]<br>[[Media:20.109_FIG_CAPTIONS_S14_Marilee.pdf | WAC lecture, figures]] | ||
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| Tue/Wed Feb 25/26 | | Tue/Wed Feb 25/26 | ||
| [http://web.mit.edu/be/people/runstadler.shtml JR] | | [http://web.mit.edu/be/people/runstadler.shtml JR] | ||
− | | [ | + | | [http://openwetware.org/wiki/User:Christopher_Bandoro | Chris] |
| [[20.109(S14):DNA sequencing (Day5)| DNA sequencing]] | | [[20.109(S14):DNA sequencing (Day5)| DNA sequencing]] | ||
|<font color=green>lab quiz</font color><br>[[Media:S14_M1D5-Lecture.pptx.pdf | Lecture]]<br>[[Media:Module1_Lecture5_LectureOutline.docx | L5 notes]]<br>[[Media:S14_M1D5_AKR_TR_filled.pdf | T/R Pre-lab]]<br>[[Media:S14_M1D5_AKR_WF_filled.pdf | W/F Pre-lab]] | |<font color=green>lab quiz</font color><br>[[Media:S14_M1D5-Lecture.pptx.pdf | Lecture]]<br>[[Media:Module1_Lecture5_LectureOutline.docx | L5 notes]]<br>[[Media:S14_M1D5_AKR_TR_filled.pdf | T/R Pre-lab]]<br>[[Media:S14_M1D5_AKR_WF_filled.pdf | W/F Pre-lab]] | ||
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| Thur/Fri Feb 27/28 | | Thur/Fri Feb 27/28 | ||
| [http://web.mit.edu/be/people/runstadler.shtml JR] | | [http://web.mit.edu/be/people/runstadler.shtml JR] | ||
− | | [ | + | | [http://openwetware.org/wiki/User:Christopher_Bandoro | Chris] |
| [[20.109(S14):Journal club I (Day6)| Journal club I]] | | [[20.109(S14):Journal club I (Day6)| Journal club I]] | ||
| [[Media:S14_M1D6-Lecture.pptx.pdf | Lecture]]<br>[[Media:Module1_Lecture6_LectureOutline.doc | L6 notes]] | | [[Media:S14_M1D6-Lecture.pptx.pdf | Lecture]]<br>[[Media:Module1_Lecture6_LectureOutline.doc | L6 notes]] | ||
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| Tue/Wed Mar 4/5 | | Tue/Wed Mar 4/5 | ||
| [http://web.mit.edu/be/people/runstadler.shtml JR] | | [http://web.mit.edu/be/people/runstadler.shtml JR] | ||
− | | [ | + | | [http://openwetware.org/wiki/User:Christopher_Bandoro | Chris] |
| [[20.109(S14):Phylogenetic and primer analyses (Day7)| Phylogenetic and primer analyses]] | | [[20.109(S14):Phylogenetic and primer analyses (Day7)| Phylogenetic and primer analyses]] | ||
| [[Media: S14_M1D7-Lecture.pptx.pdf | Lecture]]<br>[[Media:M1D7_S14_SKH_final.pdf|T/R Pre-lab]]<br>[[Media:S14_M1D7-ANS.pdf | W/F Pre-Lab]] | | [[Media: S14_M1D7-Lecture.pptx.pdf | Lecture]]<br>[[Media:M1D7_S14_SKH_final.pdf|T/R Pre-lab]]<br>[[Media:S14_M1D7-ANS.pdf | W/F Pre-Lab]] | ||
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| Thur/Fri Mar 6/7 | | Thur/Fri Mar 6/7 | ||
|[http://web.mit.edu/be/people/runstadler.shtml JR] | |[http://web.mit.edu/be/people/runstadler.shtml JR] | ||
− | | [ | + | | [http://openwetware.org/wiki/User:Christopher_Bandoro | Chris] |
| [[20.109(S14):Journal club II (Day8)| Journal club II]] | | [[20.109(S14):Journal club II (Day8)| Journal club II]] | ||
|<font color=green>lab quiz</font color><br>[[Media: S14_M1D8-Lecture-AdditionalSlides.pptx.pdf | Lecture]]<br>[[Media: S14M1-JonR_Lecture7-8_Outline.doc | L7/8 notes]]<br>[[Media:20.109_Abstract_SP14.pdf | WAC lecture, abstracts]] | |<font color=green>lab quiz</font color><br>[[Media: S14_M1D8-Lecture-AdditionalSlides.pptx.pdf | Lecture]]<br>[[Media: S14M1-JonR_Lecture7-8_Outline.doc | L7/8 notes]]<br>[[Media:20.109_Abstract_SP14.pdf | WAC lecture, abstracts]] | ||
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| Tue/Wed Mar 11/12 | | Tue/Wed Mar 11/12 | ||
| [http://web.mit.edu/be/people/samson.shtml LS] | | [http://web.mit.edu/be/people/samson.shtml LS] | ||
− | | [ | + | | [http://openwetware.org/wiki/User:Suhani_Vora |SV] |
| [[20.109(S14):Introduction to cell strains and plating (Day1)| Introduction to cell strains and plating]] | | [[20.109(S14):Introduction to cell strains and plating (Day1)| Introduction to cell strains and plating]] | ||
| [[Media:20109_S14-M2Lec1_LSamson.pdf | Lecture]]<br>[[Media:M2D1_S14_SKH_final.pdf|T/R Prelab]]<br>[[Media:S14_M2D1-ANS.pdf | W/F Pre-Lab]]<br>[[Media:20.109_IMRD_SP14a.pdf | WAC lecture, IMRD]]<br><font color = CC0000><b>Draft Mod 1 Abstract and Summary Due WED 1 PM</b></font color><br> | | [[Media:20109_S14-M2Lec1_LSamson.pdf | Lecture]]<br>[[Media:M2D1_S14_SKH_final.pdf|T/R Prelab]]<br>[[Media:S14_M2D1-ANS.pdf | W/F Pre-Lab]]<br>[[Media:20.109_IMRD_SP14a.pdf | WAC lecture, IMRD]]<br><font color = CC0000><b>Draft Mod 1 Abstract and Summary Due WED 1 PM</b></font color><br> | ||
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| Thur/Fri Mar 13/14 | | Thur/Fri Mar 13/14 | ||
| [http://web.mit.edu/be/people/samson.shtml LS] | | [http://web.mit.edu/be/people/samson.shtml LS] | ||
− | | [ | + | | [http://openwetware.org/wiki/User:Suhani_Vora |SV] |
| [[20.109(S14):Begin Western protein analysis (Day2)| Begin Western protein analysis]] | | [[20.109(S14):Begin Western protein analysis (Day2)| Begin Western protein analysis]] | ||
|[[Media:20109_S14-M2Lec2_LSamson.pdf | Lecture]]<br>[[Media:M2D2_S14_SKH_final.pdf|T/R Prelab]]<br>[[Media:S14_M2D2-ANS.pdf | W/F Pre-Lab]] | |[[Media:20109_S14-M2Lec2_LSamson.pdf | Lecture]]<br>[[Media:M2D2_S14_SKH_final.pdf|T/R Prelab]]<br>[[Media:S14_M2D2-ANS.pdf | W/F Pre-Lab]] | ||
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| Tue/Wed Mar 18/19 | | Tue/Wed Mar 18/19 | ||
| [http://web.mit.edu/be/people/samson.shtml LS] | | [http://web.mit.edu/be/people/samson.shtml LS] | ||
− | | [ | + | | [http://openwetware.org/wiki/User:Suhani_Vora |SV] |
| [[20.109(S14): Choose system conditions and paper discussion (Day3)| Choose system conditions and paper discussion]] | | [[20.109(S14): Choose system conditions and paper discussion (Day3)| Choose system conditions and paper discussion]] | ||
|<br><font color = CC0000><b>Mod 1 Memo Due</b></font color><br><font color=green>lab quiz</font color><br>[[Media:20109_S14-M2Lec3_LSamson.pdf | Lecture]]<br>[[Media:M2D3_S14_SKH_final.pdf | T/R Pre-Lab]]<br>[[Media:S14_M2D3-ANS.pdf | W/F Pre-Lab]] | |<br><font color = CC0000><b>Mod 1 Memo Due</b></font color><br><font color=green>lab quiz</font color><br>[[Media:20109_S14-M2Lec3_LSamson.pdf | Lecture]]<br>[[Media:M2D3_S14_SKH_final.pdf | T/R Pre-Lab]]<br>[[Media:S14_M2D3-ANS.pdf | W/F Pre-Lab]] | ||
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| Thur/Fri Mar 20/21 | | Thur/Fri Mar 20/21 | ||
| [http://web.mit.edu/be/people/samson.shtml LS] | | [http://web.mit.edu/be/people/samson.shtml LS] | ||
− | | [ | + | | [http://openwetware.org/wiki/User:Suhani_Vora |SV] |
| [[20.109(S14):Complete Western and prepare damaged DNA (Day4)| Complete Western and prepare damaged DNA]] | | [[20.109(S14):Complete Western and prepare damaged DNA (Day4)| Complete Western and prepare damaged DNA]] | ||
| [[Media:20109_S14-M2Lec4_LSamson.pdf | Lecture]]<br>[[Media:M2D4_S14_SKH_final.pdf| T/R Pre-lab]]<br>[[Media:S14_M2D4-ANS.pdf | W/F Pre-Lab]] | | [[Media:20109_S14-M2Lec4_LSamson.pdf | Lecture]]<br>[[Media:M2D4_S14_SKH_final.pdf| T/R Pre-lab]]<br>[[Media:S14_M2D4-ANS.pdf | W/F Pre-Lab]] | ||
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| Tue/Wed Apr 1/2 | | Tue/Wed Apr 1/2 | ||
| [http://web.mit.edu/be/people/samson.shtml LS] | | [http://web.mit.edu/be/people/samson.shtml LS] | ||
− | | [ | + | | [http://openwetware.org/wiki/User:Suhani_Vora |SV] |
| [[20.109(S14):Cell preparation for DNA repair assays (Day5)| Cell preparation for DNA repair assays]] | | [[20.109(S14):Cell preparation for DNA repair assays (Day5)| Cell preparation for DNA repair assays]] | ||
|<font color=green>lab quiz</font color><br>[[Media:20109_S14-M2Lec5_LSamson.pdf | Lecture]]<br>[[Media:M2D5_S14_SKH_final.pdf|T/R Pre-Lab]]<br>[[Media:S14_M2D5-ANS.pdf | W/F Pre-Lab]] | |<font color=green>lab quiz</font color><br>[[Media:20109_S14-M2Lec5_LSamson.pdf | Lecture]]<br>[[Media:M2D5_S14_SKH_final.pdf|T/R Pre-Lab]]<br>[[Media:S14_M2D5-ANS.pdf | W/F Pre-Lab]] | ||
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| Thur/Fri Apr 3/4 | | Thur/Fri Apr 3/4 | ||
| [http://web.mit.edu/be/people/samson.shtml LS] | | [http://web.mit.edu/be/people/samson.shtml LS] | ||
− | | [ | + | | [http://openwetware.org/wiki/User:Suhani_Vora |SV] |
| [[20.109(S14):DNA repair assays(Day6)| DNA repair assays]] | | [[20.109(S14):DNA repair assays(Day6)| DNA repair assays]] | ||
|[[Media:20109_S14-M2Lec6_LSamson.pdf | Lecture]]<br>[[Media:M2D6_S14_SKH_final.pdf|T/R Pre-Lab]]<br>[[Media:S14_M2D6-ANS.pdf | W/F Pre-Lab]]<br><font color = CC0000><b>Final Mod 1 Abstract and Summary Due</b></font color><br> | |[[Media:20109_S14-M2Lec6_LSamson.pdf | Lecture]]<br>[[Media:M2D6_S14_SKH_final.pdf|T/R Pre-Lab]]<br>[[Media:S14_M2D6-ANS.pdf | W/F Pre-Lab]]<br><font color = CC0000><b>Final Mod 1 Abstract and Summary Due</b></font color><br> | ||
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| Tue/Wed Apr 8/9 | | Tue/Wed Apr 8/9 | ||
| [http://web.mit.edu/be/people/samson.shtml LS] | | [http://web.mit.edu/be/people/samson.shtml LS] | ||
− | | [ | + | | [http://openwetware.org/wiki/User:Suhani_Vora |SV] |
| [[20.109(S14):Data analysis (Day7)| Data analysis]] | | [[20.109(S14):Data analysis (Day7)| Data analysis]] | ||
|<font color=green>lab quiz</font color><br>[[Media:ZDN_Module_Lecture_4-8-14.pdf| Lecture]]<br>[[Media:M2D7_S14_SKH_final.pdf|T/R Pre-Lab]]<br>[[Media:S14_M2D7-ANS.pdf | W/F Pre-Lab]] | |<font color=green>lab quiz</font color><br>[[Media:ZDN_Module_Lecture_4-8-14.pdf| Lecture]]<br>[[Media:M2D7_S14_SKH_final.pdf|T/R Pre-Lab]]<br>[[Media:S14_M2D7-ANS.pdf | W/F Pre-Lab]] | ||
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| 1 | | 1 | ||
| Thur/Fri Apr 10/11 | | Thur/Fri Apr 10/11 | ||
− | | [ | + | | [http://openwetware.org/wiki/User:AgiStachowiak | ANS] |
− | | [ | + | | [http://openwetware.org/wiki/User:Reginald_K._Avery |RKA] |
| [[20.109(S14):Design experiment (Day1)| Design experiment]] | | [[20.109(S14):Design experiment (Day1)| Design experiment]] | ||
− | | [[Media: 20109_S14-M3Lec1_AStachowiak.pdf | Lecture]]<br>[[Media: M3D1_S14_SKH_final.pdf | T/R Pre-Lab]] <br> | + | | [[Media: 20109_S14-M3Lec1_AStachowiak.pdf | Lecture]]<br>[[Media: M3D1_S14_SKH_final.pdf | T/R Pre-Lab]] <br>[[Media:S14_M3D1-ANS.pdf | W/F Pre-Lab]] |
|-- | |-- | ||
| 3 | | 3 | ||
| 2 | | 2 | ||
| Tue/Wed Apr 15/16 | | Tue/Wed Apr 15/16 | ||
− | | [ | + | | [http://openwetware.org/wiki/User:AgiStachowiak | ANS] |
− | | [ | + | | [http://openwetware.org/wiki/User:Reginald_K._Avery |RKA] |
| [[20.109(S14):Initiate cell culture (Day2)| Initiate cell culture]] | | [[20.109(S14):Initiate cell culture (Day2)| Initiate cell culture]] | ||
| <font color=green>lab quiz</font color><br>[[Media: 20109_S14-M3Lec2_AStachowiak.pdf | Lecture]]<br> | | <font color=green>lab quiz</font color><br>[[Media: 20109_S14-M3Lec2_AStachowiak.pdf | Lecture]]<br> | ||
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| 3 | | 3 | ||
| Thur/Fri Apr 17/18 | | Thur/Fri Apr 17/18 | ||
− | | [ | + | | [http://openwetware.org/wiki/User:AgiStachowiak | ANS] |
− | | [ | + | | [http://openwetware.org/wiki/User:Reginald_K._Avery |RKA] |
| [[20.109(S14):Testing cell viability (Day3)| Testing cell viability]] | | [[20.109(S14):Testing cell viability (Day3)| Testing cell viability]] | ||
| [[Media: 20109_S14-M3Lec3_AStachowiak.pdf | Lecture]]<br> | | [[Media: 20109_S14-M3Lec3_AStachowiak.pdf | Lecture]]<br> | ||
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| 4 | | 4 | ||
| Thu/Fri Apr 24/25 | | Thu/Fri Apr 24/25 | ||
− | | [ | + | | [http://openwetware.org/wiki/User:AgiStachowiak | ANS] |
− | | [ | + | | [http://openwetware.org/wiki/User:Reginald_K._Avery |RKA] |
| [[20.109(S14):Preparing cells for analysis (Day4)| Preparing cells for analysis]] | | [[20.109(S14):Preparing cells for analysis (Day4)| Preparing cells for analysis]] | ||
− | | <font color=green>lab quiz</font color><br>[[Media:M3D4_S14_SKH_final.pdf|T/R Pre-Lab]]<br> | + | | <font color=green>lab quiz</font color><br>[[Media: 20109_S14-M3Lec4_AStachowiak.pdf | Lecture]]<br>[[Media:M3D4_S14_SKH_final.pdf|T/R Pre-Lab]]<br>[[Media:S14_M3D4-ANS.pdf | W/F Pre-Lab]] |
|-- | |-- | ||
| | | | ||
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| 5 | | 5 | ||
| Thur/Fri May 1/2 | | Thur/Fri May 1/2 | ||
− | | [ | + | | [http://openwetware.org/wiki/User:AgiStachowiak | ANS] |
− | | [ | + | | [http://openwetware.org/wiki/User:Reginald_K._Avery |RKA] |
| [[20.109(S14):Initiating transcript and protein assays (Day5)| Initiating transcript and protein assays]] | | [[20.109(S14):Initiating transcript and protein assays (Day5)| Initiating transcript and protein assays]] | ||
− | | | + | | [[Media: 20109_S14-M3Lec5_AStachowiak.pdf | Lecture]]<br>[[Media:M3D5_S14_SKH_final.pdf|T/R Pre-Lab]]<br>[[Media:S14_M3D5-ANS.pdf | W/F Pre-Lab]] |
|-- | |-- | ||
| 3 | | 3 | ||
| 6 | | 6 | ||
| Tue/Wed May 6/7 | | Tue/Wed May 6/7 | ||
− | | [ | + | | [http://openwetware.org/wiki/User:AgiStachowiak | ANS] |
− | | [ | + | | [http://openwetware.org/wiki/User:Reginald_K._Avery |RKA] |
| [[20.109(S14):Transcript-level analysis (Day6)| Transcript-level analysis]] | | [[20.109(S14):Transcript-level analysis (Day6)| Transcript-level analysis]] | ||
− | | <font color=green>lab quiz</font color> | + | | <font color=green>lab quiz</font color><br>[[Media: 20109_S14-M3Lec6_AStachowiak.pdf | Lecture]]<br>[[Media:S14_M3D6-ANS-TR.pdf|T/R Pre-Lab]]<br>[[Media:S14_M3D6-ANS.pdf | W/F Pre-Lab]] |
|-- | |-- | ||
| 3 | | 3 | ||
| 7 | | 7 | ||
| Thur/Fri May 8/9 | | Thur/Fri May 8/9 | ||
− | | [ | + | | [http://openwetware.org/wiki/User:AgiStachowiak | ANS] |
− | | [ | + | | [http://openwetware.org/wiki/User:Reginald_K._Avery |RKA] |
| [[20.109(S14):Protein-level and wrap-up analysis (Day7)| Protein-level and wrap-up analysis]] | | [[20.109(S14):Protein-level and wrap-up analysis (Day7)| Protein-level and wrap-up analysis]] | ||
− | | <br><font color = CC0000><b>Mod 3 Mini-report Due</b></font color><br> | + | | <br><font color = CC0000><b>Mod 3 Mini-report Due</b></font color><br>[[Media:M3D7_S14_SKH_final.pdf|T/R Pre-Lab]]<br>[[Media:S14_M3D7-ANS.pdf | W/F Pre-Lab]] |
|-- | |-- | ||
| 3 | | 3 | ||
| 8 | | 8 | ||
| Tue/Wed May 13/14 | | Tue/Wed May 13/14 | ||
− | | [ | + | | [http://openwetware.org/wiki/User:AgiStachowiak | ANS] |
− | | [ | + | | [http://openwetware.org/wiki/User:Reginald_K._Avery |RKA] |
| [[20.109(S14):Student presentations (Day8)| Student presentations]] | | [[20.109(S14):Student presentations (Day8)| Student presentations]] | ||
| | | | ||
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| | | | ||
| | | | ||
− | | No lab session. Meet in ''' | + | | No lab session. Meet in '''16-220''' from 11am-1pm: feedback/discussion about class, then celebratory lunch etc. |
| | | | ||
|} | |} | ||
</center> | </center> | ||
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Latest revision as of 13:58, 29 July 2015
MODULE | DAY | DATE | LECTURER | TA | LAB | NOTES | |
Tue/Wed Feb 4/5 | ANS] | Chris] | Orientation | Introductory Lecture (PDF) T/R Pre-Lab W/F Pre-Lab | |||
1 | 1 | Thur/Fri Feb 6/7 | JR | Chris] | Microbial DNA extraction | lab orientation quiz Lecture L1 Notes T/R Pre-Lab W/F Pre-Lab | |
1 | 2 | Tue/Wed Feb 11/12 | JR | Chris] | Diagnostic primer design | Lecture L2 Notes T/R Pre-lab W/F Pre-Lab | |
1 | 3 | Thur/Fri Feb 13/14 | JR | Chris] | 16S PCR and paper discussion | lab quiz Lecture L3 Notes T/R Pre-lab W/F Pre-Lab WAC lecture, talks | |
President's Day Feb 17 | No lab Feb 18 or Feb 19 | ||||||
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1 | 4 | Thur/Fri Feb 20/21 | JR | Chris] | DNA cloning | L4 Notes T/R Pre-lab W/F Pre-Lab WAC lecture, figures | |
1 | 5 | Tue/Wed Feb 25/26 | JR | Chris] | DNA sequencing | lab quiz Lecture L5 notes T/R Pre-lab W/F Pre-lab | |
1 | 6 | Thur/Fri Feb 27/28 | JR | Chris] | Journal club I | Lecture L6 notes | |
1 | 7 | Tue/Wed Mar 4/5 | JR | Chris] | Phylogenetic and primer analyses | Lecture T/R Pre-lab W/F Pre-Lab | |
1 | 8 | Thur/Fri Mar 6/7 | JR | Chris] | Journal club II | lab quiz Lecture L7/8 notes WAC lecture, abstracts | |
2 | 1 | Tue/Wed Mar 11/12 | LS | SV] | Introduction to cell strains and plating | Lecture T/R Prelab W/F Pre-Lab WAC lecture, IMRD Draft Mod 1 Abstract and Summary Due WED 1 PM | |
2 | 2 | Thur/Fri Mar 13/14 | LS | SV] | Begin Western protein analysis | Lecture T/R Prelab W/F Pre-Lab | |
2 | 3 | Tue/Wed Mar 18/19 | LS | SV] | Choose system conditions and paper discussion | Mod 1 Memo Due lab quiz Lecture T/R Pre-Lab W/F Pre-Lab | |
2 | 4 | Thur/Fri Mar 20/21 | LS | SV] | Complete Western and prepare damaged DNA | Lecture T/R Pre-lab W/F Pre-Lab | |
Spring Break Mar 24-28 | No lab all week | ||||||
2 | 5 | Tue/Wed Apr 1/2 | LS | SV] | Cell preparation for DNA repair assays | lab quiz Lecture T/R Pre-Lab W/F Pre-Lab | |
2 | 6 | Thur/Fri Apr 3/4 | LS | SV] | DNA repair assays | Lecture T/R Pre-Lab W/F Pre-Lab Final Mod 1 Abstract and Summary Due | |
2 | 7 | Tue/Wed Apr 8/9 | LS | SV] | Data analysis | lab quiz Lecture T/R Pre-Lab W/F Pre-Lab | |
3 | 1 | Thur/Fri Apr 10/11 | ANS] | RKA] | Design experiment | Lecture T/R Pre-Lab W/F Pre-Lab | |
3 | 2 | Tue/Wed Apr 15/16 | ANS] | RKA] | Initiate cell culture | lab quiz Lecture | |
3 | 3 | Thur/Fri Apr 17/18 | ANS] | RKA] | Testing cell viability | Lecture | |
Patriot's Day April 21-22 | No lab Apr 22 or Apr 23 Mod 2 Report Due |
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3 | 4 | Thu/Fri Apr 24/25 | ANS] | RKA] | Preparing cells for analysis | lab quiz Lecture T/R Pre-Lab W/F Pre-Lab | |
Tue/Wed Apr 29/30 | No lecture or lab today. | ||||||
3 | 5 | Thur/Fri May 1/2 | ANS] | RKA] | Initiating transcript and protein assays | Lecture T/R Pre-Lab W/F Pre-Lab | |
3 | 6 | Tue/Wed May 6/7 | ANS] | RKA] | Transcript-level analysis | lab quiz Lecture T/R Pre-Lab W/F Pre-Lab | |
3 | 7 | Thur/Fri May 8/9 | ANS] | RKA] | Protein-level and wrap-up analysis | Mod 3 Mini-report Due T/R Pre-Lab W/F Pre-Lab | |
3 | 8 | Tue/Wed May 13/14 | ANS] | RKA] | Student presentations | ||
Thur May 15 | No lab session. Meet in 16-220 from 11am-1pm: feedback/discussion about class, then celebratory lunch etc. |