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  1. 20.109(F08):DNA engineering/Agarose gel electrophoresis (Day 3)
  2. 20.109(F08):DNA engineering/DNA engineering by PCR (Day 1)
  3. 20.109(F08):DNA engineering/DNA ligation and bacterial transformation (Day 4)
  4. 20.109(F08):DNA engineering/Examine candidate clones (Day 5)
  5. 20.109(F08):DNA engineering/FACS analysis (Day 8)
  6. 20.109(F08):DNA engineering/Lipofection (Day 7)
  7. 20.109(F08):DNA engineering/Restriction map and tissue culture (Day 6)
  8. 20.109(F08): Colony PCR
  9. 20.109(F08): ECD assembly
  10. 20.109(F08): Growth of phage materials
  11. 20.109(F08): Journal Club I
  12. 20.109(F08): Microarray data analysis
  13. 20.109(F08): Phage by design
  14. 20.109(F08): Phage by design, pt2
  15. 20.109(F08): Phage nanowires
  16. 20.109(F08): Probe Western
  17. 20.109(F08): Screen for phenotypes, isolate RNA
  18. 20.109(F08): Start-up expression engineering
  19. 20.109(F08): Transmission electron microscopy
  20. 20.109(F08): Western Analysis
  21. 20.109(F08): Yeast transformation
  22. 20.109(F08): cDNA synthesis and microarray
  23. 20.109(F09): Mod 2 Day 3 Journal Club I
  24. 20.109(F09): Mod 2 Day 6 Journal Club I
  25. 20.109(F09): Mod 2 Day 6 Journal Club II
  26. 20.109(F10): Fall 2011 schedule
  27. 20.109(F12): Pre-proposal WF Pinkle
  28. 20.109(F12): WF Blue pre-proposal
  29. 20.109(F12): test pages
  30. 20.109(F12): test pages 2
  31. 20.109(F12) Pre-Proposal: Engineering Viral Magnetic Nanoparticles for Magnetic Hyperthermic Cancer Therapy
  32. 20.109(F12) Pre-proposal: Inducing Apoptosis with Sound
  33. 20.109(F13): Mod 2 Day 2 Tools for Systems Biology
  34. 20.109(F13): Mod 2 Day 6 Transfection of SH2 Domains
  35. 20.109(F13): Tools for Systems Biology (Day2)
  36. 20.109(F14):OpenWetWare
  37. 20.109(F14): Fall 2012 schedule
  38. 20.109(F14): Mod 1 Day 6 Lipofection and paper discussion
  39. 20.109(F14): Practice Virtual Lab
  40. 20.109(F14): Slides for Journal Club Presentation
  41. 20.109(F14): System engineering report
  42. 20.109(F15): DNA engineering methods
  43. 20.109(F16):Test comet chip assay variables (Day3)
  44. 20.109(F16): DNA engineering presentation
  45. 20.109(F16): TA notes for M12
  46. 20.109(F18):Evaluate cell loading experiment and treat cells for genomic instability experiment (Day3)
  47. 20.109(F18):Image sub-nuclear foci assay
  48. 20.109(F18):Image sub-nuclear foci assay (Day6)
  49. 20.109(F19):Complete in silico cloning (Day1)
  50. 20.109(F19):Confirm gRNA sequence in pgRNA(Day5)
  51. 20.109(F19):Guidelines for working in the tissue culture facility
  52. 20.109(F21):Announcements
  53. 20.109(S07): Building phage nanowires
  54. 20.109(S07): Growth of phage materials
  55. 20.109(S07): Testing redesigned genomes
  56. 20.109(S08): Fall 2007 schedule
  57. 20.109(S09):OpenWetWare
  58. 20.109(S11): Spring 2010 schedule
  59. 20.109(S14): Spring 2013 schedule
  60. 20.109(S15):Data analysis and paper discussion (Day6)
  61. 20.109(S15): Mod 3 Day 1 Growth of phage materials
  62. 20.109(S15): Mod 3 Day 1 Growth of phage materials (Day 1)
  63. 20.109(S17):Guidelines for working in the tissue culture facility
  64. 20.109(S17): Fall 2016 schedule
  65. 20.109(S18):SECONDARY ASSAY D2 (Day6)
  66. 20.109(S19):Guidelines for working in the tissue culture facility
  67. 20.109(S19): M1 Mini-presentation
  68. 20.109(S20):Guidelines for working in the tissue culture facility
  69. 20.109(S20):Journal club presentation (Day4 and 6)
  70. 20.109(S21):M3D5
  71. 20.109(S22):M3D4
  72. 20.109 (S07): Atomic force microscopy
  73. 20.109 (S07): Transmission electron microscopy
  74. 20.109 Main Page
  75. 20.309:Learning outcomes
  76. 20.309: Exam 1 Topics
  77. 20.309 Assignment 1: Optics bootcamp
  78. 20.309 development to-do list
  79. 20.345:Key Factors Table
  80. 20.345:Literature search
  81. 20.345: Wiki guidelines
  82. ANOID Project
  83. Aligning the optical trap
  84. Alumni Page
  85. Assignment 10 Overview
  86. Assignment 2: epi illuminator for fluorescence microscopy
  87. Assignment 2 Part 4: Fluorescent imaging of actin
  88. Assignment 6, Part 3: Identifying unknown filter circuits
  89. Assignment 7: Amplifiers and feedback
  90. BEECH Main Page
  91. BE Classroom Computer Documentation
  92. BE TA Training(Su16):Homepage
  93. BE TA Training (Su17)
  94. BE TA Training (Su18)
  95. BE TA Training (Su19)
  96. Beech
  97. Bode plots and frequency response
  98. Bryan Hernandez/20.109/Lab notebook/Module 1/Day 2
  99. Bryan Hernandez/20.109/Lab notebook/Module 1/Day 3
  100. Bryan Hernandez/20.109/Lab notebook/Module 1/Day 4
  101. Bryan Hernandez/20.109/Lab notebook/Module 1/Day 5
  102. Bryan Hernandez/20.109/Lab notebook/Module 1/Day 6
  103. Bryan Hernandez/20.109/Lab notebook/Module 2/Day 2
  104. CRISPRi module, Part II: Increasing ethanol yield in E. coli MG1655
  105. Capacitors and inductors
  106. Cellular microrheology
  107. Creating 20.109(S17):Scan slides to identify FKBP12 binders (Day5)
  108. DNA Melter Improvements
  109. DNA Melting: Using the Matlab DNAMelter GUI
  110. DNA Melting II: Using the Matlab DNALockIn GUI
  111. DNA melting lab wiki pages
  112. Data Sheets
  113. Deconvolved Image
  114. ESTORM
  115. Equipment on loan
  116. Error analysis
  117. Estimating second order system parameters from noise power spectra using nonlinear regression
  118. Exam 2 study guide
  119. Fall 2010: DNA melting report outline
  120. Fall 2010: Problem Set 3
  121. Fall 2010 Syllabus
  122. Fall 2012: Journal Presentations
  123. Final Projects
  124. Finding and measuring things
  125. Geometrical Optics
  126. Intro Electronics Lab Report
  127. Laser cutter safe operating procedure
  128. Lecture Notes:Modeling real systems with ideal elements
  129. Limits of Detection:Report Requirements
  130. MATLAB: Estimating viscoelastic spectrum using Mason's method
  131. MATLAB: Intensity-weighted centroid noise formula
  132. MRI lab: FPGA controller documentation
  133. March14
  134. Matlab:Image Processing for Fluorescent Microscopy
  135. Matlab: Simulating Brownian motion
  136. Measuring biological forces mini-lab
  137. Measuring optical magnification
  138. Microscope Objective Lenses
  139. Nonlinear regression
  140. Optical Microscopy: Brownian motion and microscopy stability
  141. Optical Microscopy Data Sheets
  142. Optical resolution
  143. Optical trap
  144. Papers
  145. Papers to read
  146. Photobleaching Model
  147. Power spectral density
  148. Probability and statistics
  149. Problem Set 1
  150. Problem Set 2
  151. Problem Set 2 Fall 2010
  152. Procedure: Diffusion in biological gels
  153. Procedure: Particle tracking
  154. Procedure: Peptide-DNA Tethering Assay
  155. Project ideas
  156. Protocols for making microscopy samples
  157. QRT-PCR:Get Started
  158. Resource list: Fiber optics
  159. Resource list: Image Enhancement
  160. Resource list: Image processing
  161. Resource list: Matlab
  162. Resource list: Microscopy
  163. Resource list: Particle tracking
  164. Simulating diffusing microspheres in MATLAB
  165. Spring 11:CellPrinter
  166. Spring 11:Confocal Microscope
  167. Spring 11:SMR
  168. Spring 11 ChemotaxisAssayWeeklyReports
  169. Spring 11 Chemotaxis Assay Weekly Reports
  170. Spring 2011:CellFinder
  171. Spring 2011:Optical Trapping Lab
  172. Spring 2012:Snot
  173. Spring 2012: Jonathan Gootenberg STORM
  174. Spring 2012: Real Time qPCR
  175. Spring 2012 Bioinstrumentation Project Lab.
  176. Spring 2020 assignment 10
  177. TableTop MRI
  178. Technical Writing
  179. Temporary Optics Bootcamp
  180. Thermal Quenching Model
  181. ThorLabs OTKB optical trapping kit
  182. Todo List
  183. Two-color Yeast Protocols
  184. Using CRISPRi to increase ethanol yield in E. coli MG1655
  185. Using nonlinear regression to create a camera specification sheet
  186. Using tfest to find a system model

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