Difference between revisions of "20.109(F24):Assignments"

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(Other assignments)
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==Overview==
 
==Overview==
You will complete three experimental modules over the course of the semester. The modules differ in both conceptual and technical content and in the ways that your learning will be assessed.  Although your laboratory work will be done as partners, <font color = #CC0000>'''several assignments will be submitted individually (as summarized below) and should reflect your personal understanding.'''</font color> Please review the 20.109 [[20.109(F24):Laboratory_tour#Statement_on_collaboration_and_integrity| statement on collaboration and integrity]] for details concerning academic honesty in our class. You are highly encouraged to ask the teaching team any questions you have about what constitutes appropriate collaboration.
+
You will complete three experimental modules over the course of the semester. The modules differ in both conceptual and technical content and in the ways that your learning will be assessed.  Although your laboratory work will be done as partners, <font color = #319bef>'''most assignments will be submitted individually (as summarized below) and should reflect your personal understanding.'''</font color> Please review the 20.109 [[20.109(F24):Laboratory_tour#Statement_on_collaboration_and_integrity| statement on collaboration and integrity]] for details concerning academic honesty in our class. You are highly encouraged to ask the teaching team any questions you have about what constitutes appropriate collaboration.
  
 
'''Individual assignments (~60% of final grade):'''
 
'''Individual assignments (~60% of final grade):'''
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*Research proposal presentation
 
*Research proposal presentation
  
We appreciate that time management can be difficult and that learning takes place on many time-scales. However, assignments turned in at wildly different times create additional logistical burdens for the teaching team. <font color=#CC0000>'''Therefore, late assignments (both homework and major assignments) will be penalized 1/3 of a letter grade for each day late and will not be accepted after 7 days.'''</font color>
+
We appreciate that time management can be difficult and that learning takes place on many time-scales. However, assignments turned in at wildly different times create additional logistical burdens for the teaching team. Therefore, <font color=#319bef>'''late assignments (both homework and major assignments) will be penalized 1/3 of a letter grade for each day late and will not be accepted after 7 days.'''</font color>
  
 
We provide equal access to subject 20.109 for students with disabilities, in accordance with the Americans with Disabilities Act (ADA) of 1990. Please see the teaching faculty as soon as possible regarding needed accommodations.
 
We provide equal access to subject 20.109 for students with disabilities, in accordance with the Americans with Disabilities Act (ADA) of 1990. Please see the teaching faculty as soon as possible regarding needed accommodations.
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==Major assignments==
 
==Major assignments==
  
All major assignments will be submitted via [ Canvas].  Further information for each of the major assignments is provided at the link in the table below.
+
Further information for each of the major assignments is provided at the link in the table below.
  
 
{| border="1"
 
{| border="1"
 
|-
 
|-
 
| '''Assignment'''
 
| '''Assignment'''
| '''% of final grade'''
+
| '''Weight'''
| '''Links to description and/or rubric'''
+
| '''Description'''
 
|-
 
|-
| Research talk
+
| [[20.109(F24):Research talk | Research talk]]
| 5
+
| 5%
| [[20.109(F24):Research talk | Assignment description]]
+
| The Research talk is a short, verbal presentation focused on a key experiment from Mod1.  The goal of this assignment is to learn how to clearly and cohesively describe an an important aspect of your science to someone not familiar with your project. 
 
|-
 
|-
| Data summary
+
| [[20.109(F24):Data Summary| Data summary]]
| 15
+
| 15%
| [[20.109(F24):Data Summary| Assignment description]]
+
| The Data summary is a detailed, written outline that presents all of the experimental work completed in Mod1.  The goal of this assignment is to tie the data from the experiments into a cohesive narrative.  To give the narrative context, important background information and relevant implications are also part of the assignment.
 
|-
 
|-
| Journal article presentation
+
| [[20.109(F24):Journal article presentation |Journal article presentation]]
| 15
+
| 15%
| [[20.109(F24):Journal article presentation |Assignment description and article sign-up]]<br>[[ Evaluation rubric (PDF download)]]
+
| The Journal article presentation is a formal, verbal presentation of a published, peer-reviewed article related to the content in Mod2.  The goal of this assignment is to research the experimental methods and results reported by the authors, then present the information to scientifically knowledgeable audience that is unfamiliar with the paper.  Relevant background information is also part of the presentation to ensure the audience is able to follow the experimental work.
 
|-
 
|-
| Research article
+
| [[20.109(F24):Research article  | Research article]]
| 20
+
| 20%
| [[20.109(F24):Research article  | Assignment description]]
+
| The Research article is a formal, written manuscript that presents all of the experimental work completed in Mod2.  The goal of this assignment is to craft a narrative that is similar in format and quality to a published paper.
 
|-
 
|-
| Research proposal presentation
+
| [[20.109(F24):Research proposal presentation | Research proposal presentation]]
| 20
+
| 20%
| [[20.109(F24):Research proposal presentation | Assignment description]]<br>[[ Evaluation rubric (PDF download)]]
+
| The Research proposal presentation is a technical, verbal presentation of a novel research idea.  The goal of this assignment is to use biological engineering strategies / tools / technologies to solve a need.
 
|}
 
|}
  
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In addition to the major assignments listed above, the following will contribute to the final grade:
 
In addition to the major assignments listed above, the following will contribute to the final grade:
  
===Homework assignments (15% of final grade)===  
+
===Homework (15% of final grade)===  
  
*All homework assignments will be submitted via [ Canvas].
+
Homework assignments are intended to keep you on pace for completing the major assignments. Each homework is designed to help you prepare a portion of one of the more complicated assignments. This allows you to practice your skills and receive feedback on your work in a more low-stakes manner.
*Homework assignments are intended to keep you on pace for completing the major assignments.  
+
*All homework should be completed individually unless specifically noted.
+
*The assignments can be found on the [[20.109(F24):Homework| Homework tab]] and are linked to the [[20.109(F24):Fall 2024 schedule| Schedule tab]] to reflect the due date.
+
  
 
===Participation (5% of final grade)===  
 
===Participation (5% of final grade)===  
  
The participation will be based on three aspects of the class:  
+
Participation is based on three components of the class: (1) attendance in lecture, and (2) engagement during group discussions, and (3) being an active audience member during presentations.  Attendance is key to understanding the overall scope and important concepts relevant to each module.  By understanding the lecture content, you will be better equipped to participate in group discussions focused on publications that are relevant to the each module and be able to formulate thoughtful, scientifically-driven questions during peer presentations.
*Attendance in lecture
+
*Active participation in group discussions
+
*Progress through laboratory exercises
+
  
 
===Quizzes (5% of final grade)===  
 
===Quizzes (5% of final grade)===  
*There are two main purposes for quizzes in 20.109: (1) to refresh your memory about the long-term experiment you are performing, and (2) to provide you with an opportunity to show your technical knowledge decoupled from your communication skills.
+
Quizzes serve two purposes: (1) to refresh your memory about the long-term project you are completing, and (2) to provide you with an opportunity to show your technical knowledge decoupled from your communication skills. The questions are based on content from both lecture and laboratory prelabs within each module.
*Questions will be based on content from both lecture and laboratory within a module. Questions will concern fundamentals rather than details. For example, you might be asked to interpret a piece of data, define a major concept, or perform a short calculation.
+

Revision as of 20:16, 13 June 2024

20.109(F24): Laboratory Fundamentals of Biological Engineering

Fa24 banner image.png

Fall 2024 schedule        FYI        Assignments        Homework        Class data        Communication        Accessibility

       M1: Genomic integrity        M2: Protein engineering        M3: Project design       


Overview

You will complete three experimental modules over the course of the semester. The modules differ in both conceptual and technical content and in the ways that your learning will be assessed. Although your laboratory work will be done as partners, most assignments will be submitted individually (as summarized below) and should reflect your personal understanding. Please review the 20.109 statement on collaboration and integrity for details concerning academic honesty in our class. You are highly encouraged to ask the teaching team any questions you have about what constitutes appropriate collaboration.

Individual assignments (~60% of final grade):

  • Most homework, laboratory notebooks, and quizzes
  • Research talk
  • Journal club presentation
  • Research article

Team assignments (~40% of final grade):

  • Some homework, laboratory notebooks, and quizzes
  • Data summary (draft and revision)
  • Research proposal presentation

We appreciate that time management can be difficult and that learning takes place on many time-scales. However, assignments turned in at wildly different times create additional logistical burdens for the teaching team. Therefore, late assignments (both homework and major assignments) will be penalized 1/3 of a letter grade for each day late and will not be accepted after 7 days.

We provide equal access to subject 20.109 for students with disabilities, in accordance with the Americans with Disabilities Act (ADA) of 1990. Please see the teaching faculty as soon as possible regarding needed accommodations.

If you find yourself in a situation where issues outside of the class are impacting your performance (for example, if you have a personal or medical issue), consider visiting Student Support Services ("S cubed"). The deans in S3 will verify your situation, and then discuss with you how to address the missed work. We will not excuse coursework or provide extensions without verification from S3.

Major assignments

Further information for each of the major assignments is provided at the link in the table below.

Assignment Weight Description
Research talk 5% The Research talk is a short, verbal presentation focused on a key experiment from Mod1. The goal of this assignment is to learn how to clearly and cohesively describe an an important aspect of your science to someone not familiar with your project.
Data summary 15% The Data summary is a detailed, written outline that presents all of the experimental work completed in Mod1. The goal of this assignment is to tie the data from the experiments into a cohesive narrative. To give the narrative context, important background information and relevant implications are also part of the assignment.
Journal article presentation 15% The Journal article presentation is a formal, verbal presentation of a published, peer-reviewed article related to the content in Mod2. The goal of this assignment is to research the experimental methods and results reported by the authors, then present the information to scientifically knowledgeable audience that is unfamiliar with the paper. Relevant background information is also part of the presentation to ensure the audience is able to follow the experimental work.
Research article 20% The Research article is a formal, written manuscript that presents all of the experimental work completed in Mod2. The goal of this assignment is to craft a narrative that is similar in format and quality to a published paper.
Research proposal presentation 20% The Research proposal presentation is a technical, verbal presentation of a novel research idea. The goal of this assignment is to use biological engineering strategies / tools / technologies to solve a need.

Other assignments

In addition to the major assignments listed above, the following will contribute to the final grade:

Homework (15% of final grade)

Homework assignments are intended to keep you on pace for completing the major assignments. Each homework is designed to help you prepare a portion of one of the more complicated assignments. This allows you to practice your skills and receive feedback on your work in a more low-stakes manner.

Participation (5% of final grade)

Participation is based on three components of the class: (1) attendance in lecture, and (2) engagement during group discussions, and (3) being an active audience member during presentations. Attendance is key to understanding the overall scope and important concepts relevant to each module. By understanding the lecture content, you will be better equipped to participate in group discussions focused on publications that are relevant to the each module and be able to formulate thoughtful, scientifically-driven questions during peer presentations.

Quizzes (5% of final grade)

Quizzes serve two purposes: (1) to refresh your memory about the long-term project you are completing, and (2) to provide you with an opportunity to show your technical knowledge decoupled from your communication skills. The questions are based on content from both lecture and laboratory prelabs within each module.