Difference between revisions of "Talk:20.109(F17):Module 1"
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=CometChip Data= | =CometChip Data= | ||
− | The 'data' below refer to Excel spreadsheets in which | + | The 'data' below refer to Excel spreadsheets you will upload, in which |
*Rows A, B, C were triplicates of wild type MEF cells | *Rows A, B, C were triplicates of wild type MEF cells | ||
*Rows D, E, F were triplicates of mutant MEF cells | *Rows D, E, F were triplicates of mutant MEF cells | ||
Line 19: | Line 19: | ||
|- | |- | ||
|T/R red | |T/R red | ||
− | |[[Media: | + | |[[Media:171003TRred_Buffer.xlsx| buffer_data]][[Media:171003TRred_Enzyme.xlsx| enzyme_data]] |
|[[Media:MMS_Buffer_Part1.zip| buffer_part1]][[Media:MMS_Buffer_Part2.zip| buffer_part2]][[Media:MMS_Enzyme_Part1.zip| enzyme_part1]][[Media:MMS_Enzyme_Part2.zip| enzyme_part2]] | |[[Media:MMS_Buffer_Part1.zip| buffer_part1]][[Media:MMS_Buffer_Part2.zip| buffer_part2]][[Media:MMS_Enzyme_Part1.zip| enzyme_part1]][[Media:MMS_Enzyme_Part2.zip| enzyme_part2]] | ||
|- | |- | ||
|T/R orange | |T/R orange | ||
− | |[[Media: | + | |[[Media:171003TRorange_Buffer.xlsx| buffer_data]][[Media:171003TRorange_Enzyme.xlsx| enzyme_data]] |
|[[Media:TRorange.zip| all_images]] | |[[Media:TRorange.zip| all_images]] | ||
|- | |- | ||
|T/R yellow | |T/R yellow | ||
− | |[[Media: | + | |[[Media:171003TRyellow_Buffer.xlsx| buffer_data]][[Media:171003TRyellow_Enzyme.xlsx| enzyme_data]] |
|[[Media:MMS_Buffer_Part1.zip| buffer_part1]][[Media:MMS_Buffer_Part2.zip| buffer_part2]][[Media:MMS_Enzyme_Part1.zip| enzyme_part1]][[Media:MMS_Enzyme_Part2.zip| enzyme_part2]] | |[[Media:MMS_Buffer_Part1.zip| buffer_part1]][[Media:MMS_Buffer_Part2.zip| buffer_part2]][[Media:MMS_Enzyme_Part1.zip| enzyme_part1]][[Media:MMS_Enzyme_Part2.zip| enzyme_part2]] | ||
|- | |- | ||
|T/R green | |T/R green | ||
− | |[[Media: | + | |[[Media:171003TRgreen_Buffer.xlsx| buffer_data]][[Media:171003TRgreen_Enzyme.xlsx| enzyme_data]] |
|[[Media:TRgreen.zip| all_images]] | |[[Media:TRgreen.zip| all_images]] | ||
|- | |- | ||
|T/R blue | |T/R blue | ||
− | |[[Media: | + | |[[Media:171003TRblue_Buffer.xlsx| buffer_data]][[Media:171003TRblue_Enzyme.xlsx| enzyme_data]] |
|[[Media:MMS_Buffer_Part1.zip| buffer_part1]][[Media:MMS_Buffer_Part2.zip| buffer_part2]][[Media:MMS_Enzyme_Part1.zip| enzyme_part1]][[Media:MMS_Enzyme_Part2.zip| enzyme_part2]] | |[[Media:MMS_Buffer_Part1.zip| buffer_part1]][[Media:MMS_Buffer_Part2.zip| buffer_part2]][[Media:MMS_Enzyme_Part1.zip| enzyme_part1]][[Media:MMS_Enzyme_Part2.zip| enzyme_part2]] | ||
|- | |- | ||
|T/R pink | |T/R pink | ||
− | |[[Media: | + | |[[Media:171003TRpink_Buffer.xlsx| buffer_data]][[Media:171003TRpink_Enzyme.xlsx| enzyme_data]] |
|[[Media:TRpink.zip| all_images]] | |[[Media:TRpink.zip| all_images]] | ||
|- | |- | ||
|T/R purple | |T/R purple | ||
− | |[[Media: | + | |[[Media:171003TRpurple_Buffer.xlsx| buffer_data]][[Media:171003TRpurple_Enzyme.xlsx| enzyme_data]] |
|[[Media:TRpurple.zip| all_images]] | |[[Media:TRpurple.zip| all_images]] | ||
|- | |- | ||
|T/R white | |T/R white | ||
− | |[[Media: | + | |[[Media:171003TRwhite_Buffer.xlsx| buffer_data]][[Media:171003TRwhite_Enzyme.xlsx| enzyme_data]] |
|[[Media:MMS_Buffer_Part1.zip| buffer_part1]][[Media:MMS_Buffer_Part2.zip| buffer_part2]][[Media:MMS_Enzyme_Part1.zip| enzyme_part1]][[Media:MMS_Enzyme_Part2.zip| enzyme_part2]] | |[[Media:MMS_Buffer_Part1.zip| buffer_part1]][[Media:MMS_Buffer_Part2.zip| buffer_part2]][[Media:MMS_Enzyme_Part1.zip| enzyme_part1]][[Media:MMS_Enzyme_Part2.zip| enzyme_part2]] | ||
|- | |- | ||
|W/F red | |W/F red | ||
− | |[[Media: | + | |[[Media:171004WFred_Buffer.xlsx| buffer_data]][[Media:171004WFred_Enzyme.xlsx| enzyme_data]] |
|[[Media:WFred.zip| all_images]] | |[[Media:WFred.zip| all_images]] | ||
|- | |- | ||
|W/F orange | |W/F orange | ||
− | |[[Media: | + | |[[Media:171004WForange_Buffer.xlsx| buffer_data]][[Media:171004WForange_Enzyme.xlsx| enzyme_data]] |
|[[Media:WForange.zip| all_images]] | |[[Media:WForange.zip| all_images]] | ||
|- | |- | ||
|W/F green | |W/F green | ||
− | |[[Media: | + | |[[Media:171004WFgreen_Buffer.xlsx| buffer_data]][[Media:171004WFgreen_Enzyme.xlsx| enzyme_data]] |
|[[Media:MMS_Buffer_Part1.zip| buffer_part1]][[Media:MMS_Buffer_Part2.zip| buffer_part2]][[Media:MMS_Enzyme_Part1.zip| enzyme_part1]][[Media:MMS_Enzyme_Part2.zip| enzyme_part2]] | |[[Media:MMS_Buffer_Part1.zip| buffer_part1]][[Media:MMS_Buffer_Part2.zip| buffer_part2]][[Media:MMS_Enzyme_Part1.zip| enzyme_part1]][[Media:MMS_Enzyme_Part2.zip| enzyme_part2]] | ||
|- | |- | ||
|W/F blue | |W/F blue | ||
− | |[[Media: | + | |[[Media:171004WFblue_Buffer.xlsx| buffer_data]][[Media:171004WFblue_Enzyme.xlsx| enzyme_data]] |
|[[Media:MMS_Buffer_Part1.zip| buffer_part1]][[Media:MMS_Buffer_Part2.zip| buffer_part2]][[Media:MMS_Enzyme_Part1.zip| enzyme_part1]][[Media:MMS_Enzyme_Part2.zip| enzyme_part2]] | |[[Media:MMS_Buffer_Part1.zip| buffer_part1]][[Media:MMS_Buffer_Part2.zip| buffer_part2]][[Media:MMS_Enzyme_Part1.zip| enzyme_part1]][[Media:MMS_Enzyme_Part2.zip| enzyme_part2]] | ||
|- | |- | ||
|} | |} |
Revision as of 17:33, 2 October 2017
CometChip Data
The 'data' below refer to Excel spreadsheets you will upload, in which
- Rows A, B, C were triplicates of wild type MEF cells
- Rows D, E, F were triplicates of mutant MEF cells
- Columns 1-6 correspond to the 6 drug doses the cells were treated with:
- H2O2: 0, 5, 10, 15, 20, 25 μM
- MMS: 0, 0.1, 0.2, 0.5, 6, and 8 mM.
- The 'comet number' tab indicates how many comets were analyzed in each image.
- The other tabs represent various options to quantify DNA damage.
team | data summary | images |
T/R red | buffer_data enzyme_data | buffer_part1 buffer_part2 enzyme_part1 enzyme_part2 |
T/R orange | buffer_data enzyme_data | all_images |
T/R yellow | buffer_data enzyme_data | buffer_part1 buffer_part2 enzyme_part1 enzyme_part2 |
T/R green | buffer_data enzyme_data | all_images |
T/R blue | buffer_data enzyme_data | buffer_part1 buffer_part2 enzyme_part1 enzyme_part2 |
T/R pink | buffer_data enzyme_data | all_images |
T/R purple | buffer_data enzyme_data | all_images |
T/R white | buffer_data enzyme_data | buffer_part1 buffer_part2 enzyme_part1 enzyme_part2 |
W/F red | buffer_data enzyme_data | all_images |
W/F orange | buffer_data enzyme_data | all_images |
W/F green | buffer_data enzyme_data | buffer_part1 buffer_part2 enzyme_part1 enzyme_part2 |
W/F blue | buffer_data enzyme_data | buffer_part1 buffer_part2 enzyme_part1 enzyme_part2 |